Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444686 Ptep1.0/2.0 NW_024969659.1 2187273 2252763 - C-Maf-inducing protein aug3.g18028 LOC107444686 0
LOC107437743 Ptep1.0/2.0 NW_024969659.1 2277997 2288054 - programmed cell death protein 5-like aug3.g18027 LOC107437743 0
LOC107447556 Ptep1.0/2.0 NW_024970034.1 488142 517261 + protein phosphatase 1 regulatory subunit 3B aug3.g1802 LOC107447556 0
LOC107444681 Ptep1.0/2.0 NW_024970375.1 14172 74022 - Down syndrome cell adhesion molecule-like protein Dscam2 aug3.g18024 LOC107444681,LOC107441609 0
LOC107444679 Ptep1.0/2.0 NW_024970375.1 59672 69687 - Down syndrome cell adhesion molecule-like protein 1 aug3.g18023,aug3.g18024 LOC107444679 0
LOC107444678 Ptep1.0/2.0 NW_024971175.1 96117 99818 + delta-latroinsectotoxin-Lt1a aug3.g18022 LOC107444678 0
LOC107444674 Ptep1.0/2.0 NW_024971175.1 110872 114712 - delta-latroinsectotoxin-Lt1a-like aug3.g18021 LOC107444674 0
LOC107444673 Ptep1.0/2.0 NW_024971175.1 122066 122425 + uncharacterized protein K02A2.6-like aug3.g18020 LOC107444673 0
LOC107444683 Ptep1.0/2.0 NW_024971512.1 10587 74375 + phosphatidylinositol 4-phosphate 5-kinase type-1 alpha aug3.g18025 LOC107444683,LOC110282222 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02