Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444732 Ptep1.0/2.0 NW_024969652.1 402694 407180 + uncharacterized LOC107444732 aug3.g18060 LOC107444732 0
LOC107457335 Ptep1.0/2.0 NW_024969652.1 431511 463596 - lipid droplet-regulating VLDL assembly factor AUP1 homolog aug3.g18062 LOC107457335 0
LOC107447559 Ptep1.0/2.0 NW_024970034.1 321953 401762 - mitotic-spindle organizing protein 2-like aug3.g1806 LOC107447559 0
LOC107444748 Ptep1.0/2.0 NW_024970651.1 124752 158939 - uncharacterized LOC107444748 aug3.g18068 LOC107444748 0
LOC107444734 Ptep1.0/2.0 NW_024971370.1 51753 100766 + uncharacterized LOC107444734 aug3.g18064,aug3.g18063 LOC107444734 0
LOC107444750 Ptep1.0/2.0 NW_024971407.1 23645 79998 - band 7 protein AGAP004871 aug3.g18069 LOC107444750 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02