Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447560 Ptep1.0/2.0 NW_024970034.1 157981 234624 - band 4.1-like protein 4 aug3.g1812 LOC107447560 0
LOC107444813 Ptep1.0/2.0 NW_024970572.1 424947 451454 - metaxin-1 aug3.g18122 LOC107444813 0
LOC107444814 Ptep1.0/2.0 NW_024970572.1 457480 468109 + uncharacterized LOC107444814 aug3.g18121 LOC107444814 0
LOC122268275 Ptep1.0/2.0 NW_024970572.1 476887 487423 + uncharacterized LOC122268275 aug3.g18121 LOC107444814 0
LOC107444823 Ptep1.0/2.0 NW_024971005.1 5948 22858 - L-xylulose reductase aug3.g18124 LOC107444823 0
LOC107444822 Ptep1.0/2.0 NW_024971005.1 23301 36506 + L-xylulose reductase aug3.g18125 LOC107444822 0
LOC107444827 Ptep1.0/2.0 NW_024971005.1 39754 52942 - L-xylulose reductase aug3.g18126 LOC107444827 0
LOC107444819 Ptep1.0/2.0 NW_024971005.1 53788 64076 - L-xylulose reductase-like aug3.g18126 LOC107444819 0
LOC107444820 Ptep1.0/2.0 NW_024971005.1 66450 88825 + L-xylulose reductase aug3.g18127 LOC107444820 0
LOC107444817 Ptep1.0/2.0 NW_024971005.1 103195 118807 - L-xylulose reductase-like aug3.g18128 LOC107444817 0
LOC107444828 Ptep1.0/2.0 NW_024971005.1 133524 146807 - L-xylulose reductase aug3.g18129 LOC107444828 0
LOC107444826 Ptep1.0/2.0 NW_024971005.1 151865 180358 - L-xylulose reductase-like aug3.g18132,aug3.g18129 LOC107444821,LOC107444826 0
LOC107444806 Ptep1.0/2.0 NW_024971209.1 2340 25570 - succinate--hydroxymethylglutarate CoA-transferase aug3.g18120 LOC107444806 0
LOC107444816 Ptep1.0/2.0 NW_024974943.1 365 5087 - L-xylulose reductase-like aug3.g18123 LOC107444816 0
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02