Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107444929 Ptep1.0/2.0 NW_024969781.1 199758 217927 - DDB1- and CUL4-associated factor 7 aug3.g18203,aug3.g18204 LOC107444929 0
LOC107444930 Ptep1.0/2.0 NW_024969781.1 218089 225913 + nucleoredoxin-like protein 2 aug3.g18205 LOC107444930 0
LOC107444928 Ptep1.0/2.0 NW_024969781.1 239822 244544 - STE20-related kinase adapter protein alpha aug3.g18206 LOC107444928 0
LOC107444927 Ptep1.0/2.0 NW_024969781.1 244622 288661 + glycogen debranching enzyme aug3.g18207 LOC107444927 0
LOC107452069 Ptep1.0/2.0 NW_024969781.1 289247 344195 - protein psiD aug3.g18208,aug3.g4489 LOC107452069 0
LOC107447593 Ptep1.0/2.0 NW_024970391.1 368198 396275 - hexokinase type 2 aug3.g1820 LOC107447593 0
LOC107437300 Ptep1.0/2.0 NW_024970596.1 308728 311635 + glycine-rich cell wall structural protein-like aug3.g12201,aug3.g18202 LOC107437300 0
LOC122271145 Ptep1.0/2.0 NW_024970596.1 325120 328084 + glycine-rich cell wall structural protein-like aug3.g18202 NA 0
LOC107444931 Ptep1.0/2.0 NW_024971273.1 22162 93925 - uncharacterized LOC107444931 aug3.g20031,aug3.g18209,aug3.g14562 LOC107444931 0
LOC107444920 Ptep1.0/2.0 NW_024971364.1 76588 80340 - histidine-rich glycoprotein-like aug3.g18200,aug3.g18201 LOC107444920 0
LOC107444922 Ptep1.0/2.0 NW_024971364.1 87620 91438 - glycine-rich cell wall structural protein 1.8-like aug3.g18201 LOC107444922 0
LOC107444917 Ptep1.0/2.0 NW_024971364.1 97029 99689 - glycine-rich cell wall structural protein-like aug3.g18202 LOC107444917 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02