Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC110283573 Ptep1.0/2.0 NW_024969791.1 1101221 1114656 - uncharacterized LOC110283573 aug3.g18210 LOC107444958,LOC110283573 8e-163
LOC107447589 Ptep1.0/2.0 NW_024970391.1 343461 355993 - sulfotransferase 4A1 aug3.g1821 LOC107447589 0
LOC107442963 Ptep1.0/2.0 NW_024971044.1 4097 6627 + uncharacterized LOC107442963 aug3.g9928,aug3.g18219,aug3.g10403 LOC107442963 0
LOC107446331 Ptep1.0/2.0 NW_024971207.1 168466 172645 - adult-specific rigid cuticular protein 15.7-like aug3.g19088,aug3.g18218 LOC107446331 0
LOC107444960 Ptep1.0/2.0 NW_024971663.1 21197 39893 - uncharacterized LOC107444960 aug3.g18217 LOC107444960 0
LOC107444961 Ptep1.0/2.0 NW_024971663.1 42917 50438 - uncharacterized LOC107444961 aug3.g18216 LOC107444961 0
LOC107448907 Ptep1.0/2.0 NW_024971691.1 25731 28306 + cuticle protein 16.5-like aug3.g18219 LOC107448907 0
LOC107444963 Ptep1.0/2.0 NW_024972056.1 11551 14418 + uncharacterized LOC107444963 aug3.g18219 LOC107444963 0
LOC107444959 Ptep1.0/2.0 NW_025029433.1 25095 35895 - uncharacterized LOC107444959 aug3.g18210 LOC107444959 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02