Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447633 Ptep1.0/2.0 NW_024969691.1 1155855 1178212 - eukaryotic translation initiation factor 3 subunit J aug3.g1839 LOC107447633 0
LOC107445224 Ptep1.0/2.0 NW_024970111.1 42027 46018 + uncharacterized LOC107445224 aug3.g18398 LOC107445224 6e-82
LOC107445227 Ptep1.0/2.0 NW_024970111.1 50018 53230 + uncharacterized LOC107445227 aug3.g18398 LOC107445227 0
LOC107445230 Ptep1.0/2.0 NW_024970111.1 56104 61688 + uncharacterized LOC107445230 aug3.g18398 LOC107445230 0
LOC107445228 Ptep1.0/2.0 NW_024970111.1 88004 113931 - protein gooseberry aug3.g18397 LOC107445228 0
LOC107451667 Ptep1.0/2.0 NW_024970495.1 11066 16375 + uncharacterized LOC107451667 aug3.g17854,aug3.g18395,aug3.g18187 LOC107451667 0
LOC107445220 Ptep1.0/2.0 NW_024970952.1 4539 25049 + uncharacterized LOC107445220 aug3.g18391 LOC107445220 0
LOC107445215 Ptep1.0/2.0 NW_024970952.1 24832 27120 + uncharacterized LOC107445215 aug3.g18391,aug3.g18393 LOC107445215 0
LOC107445493 Ptep1.0/2.0 NW_024971992.1 41623 42114 - extensin-like aug3.g24750,aug3.g18390,aug3.g12240,aug3.g10966 LOC107445493 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02