Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447628 Ptep1.0/2.0 NW_024969691.1 1195823 1256237 + pleckstrin homology domain-containing family O member 1-A aug3.g1840 LOC107447628 0
LOC107445234 Ptep1.0/2.0 NW_024969692.1 1222255 1223463 - glutamate receptor-like aug3.g20123,aug3.g18403 LOC107445234 0
LOC107445235 Ptep1.0/2.0 NW_024969692.1 1230287 1231756 - glutamate [NMDA] receptor subunit 1-like aug3.g18404 LOC107445235 0
LOC107445236 Ptep1.0/2.0 NW_024969692.1 1235551 1293988 - dipeptidyl peptidase 9 aug3.g18405 LOC107445236 0
LOC107444870 Ptep1.0/2.0 NW_024969805.1 7210 11364 + probable serine/threonine-protein kinase DDB_G0284251 aug3.g18149,aug3.g4815,aug3.g18402,aug3.g4328,aug3.g14263 LOC107444870 0
LOC107445225 Ptep1.0/2.0 NW_024970111.1 1461 11394 + leucine-rich repeat LGI family member 4 aug3.g18400 LOC107445225 0
LOC107445229 Ptep1.0/2.0 NW_024970111.1 15110 32382 + leucine-rich repeat-containing protein 15-like aug3.g18400 LOC107445229 0
LOC107445233 Ptep1.0/2.0 NW_024970396.1 308539 337354 - cyclin-dependent kinase 9-like aug3.g18402,aug3.g6963 LOC107445233 0
LOC107445248 Ptep1.0/2.0 NW_024970407.1 30039 108690 - calsyntenin-1 aug3.g18408,aug3.g8283,aug3.g21819 LOC107445248 0
LOC107455264 Ptep1.0/2.0 NW_024970429.1 4515 7774 - cyclin-dependent kinase 9-like aug3.g18402 LOC107455264 0
LOC107442043 Ptep1.0/2.0 NW_024970605.1 28028 143110 + cholecystokinin receptor type A aug3.g18407,aug3.g9603,aug3.g16313 LOC107442043 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02