Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC110282235 Ptep1.0/2.0 NW_024969691.1 1148277 1155504 - uncharacterized LOC110282235 aug3.g18571 LOC110282235 0
LOC107447687 Ptep1.0/2.0 NW_024969709.1 571893 961241 + teneurin-m aug3.g1857,aug3.g11785 LOC107447687 0
LOC107439364 Ptep1.0/2.0 NW_024970107.1 583085 601095 - uncharacterized LOC107439364 aug3.g1760,aug3.g18572,aug3.g13720 LOC107439364 0
LOC122270547 Ptep1.0/2.0 NW_024970233.1 1067 1696 + secreted RxLR effector protein 161-like aug3.g18577,aug3.g17029 NA 0
LOC107445490 Ptep1.0/2.0 NW_024970233.1 3806 34578 - WD repeat-containing protein 36 aug3.g18578 LOC107445490 0
LOC107445472 Ptep1.0/2.0 NW_024970233.1 34688 46891 + uncharacterized LOC107445472 aug3.g18579 LOC107445472 0
LOC107441111 Ptep1.0/2.0 NW_024970462.1 139287 190299 + lysine-specific demethylase 5A aug3.g15051,aug3.g20361,aug3.g18574 LOC107441111 0
LOC122271481 Ptep1.0/2.0 NW_024970861.1 44293 50721 - uncharacterized LOC122271481 aug3.g18571 NA 3e-154
LOC107436998 Ptep1.0/2.0 NW_024971448.1 179 23405 + T-complex protein 1 subunit beta aug3.g22994,aug3.g18575 LOC107436998 0
LOC107445476 Ptep1.0/2.0 NW_024971448.1 31856 49085 + uncharacterized LOC107445476 aug3.g18576 LOC107445476 0
LOC122272241 Ptep1.0/2.0 NW_024971677.1 27347 32460 + uncharacterized LOC122272241 aug3.g18574 NA 0
LOC107445467 Ptep1.0/2.0 NW_024972025.1 7130 22917 + 26S proteasome non-ATPase regulatory subunit 2 aug3.g18571 LOC107445467 0
LOC107445466 Ptep1.0/2.0 NW_024972025.1 22862 37968 - peptide chain release factor 1-like, mitochondrial aug3.g18570 LOC107445466 0
LOC122273020 Ptep1.0/2.0 NW_024973743.1 881 9991 - 26S proteasome non-ATPase regulatory subunit 2-like aug3.g18571 LOC107445467 0
LOC122274086 Ptep1.0/2.0 NW_024990823.1 785 1805 + uncharacterized LOC122274086 aug3.g18572 NA 0
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02