Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268978 Ptep1.0/2.0 NW_024969709.1 181393 188060 + regucalcin-like aug3.g1863 LOC107447684 0
LOC107440395 Ptep1.0/2.0 NW_024969830.1 891623 911741 - uncharacterized LOC107440395 aug3.g14517,aug3.g26065,aug3.g20356,aug3.g23762,aug3.g18634 LOC107440395 0
LOC107445606 Ptep1.0/2.0 NW_024970443.1 218426 256463 + serine/threonine-protein kinase LMTK1 aug3.g18633 LOC107445606 0
LOC107445605 Ptep1.0/2.0 NW_024970443.1 267921 330618 - protein SMG7 aug3.g18632 LOC107445605 0
LOC110282374 Ptep1.0/2.0 NW_024970443.1 330814 339284 + cytochrome c oxidase assembly protein COX19 aug3.g18631 LOC110282374 0
LOC107445610 Ptep1.0/2.0 NW_024977054.1 2639 3595 - uncharacterized LOC107445610 aug3.g18638,aug3.g24144 LOC107445610 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02