Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437924 Ptep1.0/2.0 NW_024969620.1 12652 13332 - uncharacterized LOC107437924 aug3.g12671,aug3.g151,aug3.g4138,aug3.g14158,aug3.g25854,aug3.g18687,aug3.g19606 LOC107437924 0
LOC107445692 Ptep1.0/2.0 NW_024969647.1 613051 628807 - uncharacterized LOC107445692 aug3.g18685,aug3.g20169 LOC107445692 0
LOC122271954 Ptep1.0/2.0 NW_024969647.1 632362 636540 - uncharacterized LOC122271954 aug3.g18685 LOC107445692 4e-146
LOC107445693 Ptep1.0/2.0 NW_024969647.1 636650 680968 + importin-9 aug3.g18686 LOC107445693 0
LOC110282746 Ptep1.0/2.0 NW_024969709.1 12025 23057 - cell wall integrity and stress response component 2-like aug3.g1868 LOC110282746 0
LOC107436355 Ptep1.0/2.0 NW_024969815.1 763066 807749 - oocyte zinc finger protein XlCOF6.1 aug3.g18966,aug3.g16370,aug3.g11139,aug3.g23931,aug3.g10099,aug3.g19028,aug3.g26680,aug3.g658,aug3.g6866,aug3.g3777,aug3.g13767,aug3.g1246,aug3.g20365,aug3.g12813,aug3.g18681,aug3.g5858,aug3.g20791,aug3.g17997,aug3.g11223,aug3.g15649,aug3.g3781,aug3.g2204 LOC107454207,LOC107436355 0
LOC107445665 Ptep1.0/2.0 NW_024970592.1 73541 94954 - survival of motor neuron protein aug3.g18680 LOC107445665 0
LOC107436596 Ptep1.0/2.0 NW_024970702.1 45271 136247 + uncharacterized LOC107436596 aug3.g9447,aug3.g9446,aug3.g18684,aug3.g20031,aug3.g13166,aug3.g18034,aug3.g13168,aug3.g8230,aug3.g19472,aug3.g1173 LOC107436596 0
LOC110283128 Ptep1.0/2.0 NW_024971793.1 16967 19813 + uncharacterized LOC110283128 aug3.g18682 LOC110283128 0
LOC122272600 Ptep1.0/2.0 NW_024972333.1 6022 8704 + uncharacterized LOC122272600 aug3.g18682 NA 1e-113
LOC122273642 Ptep1.0/2.0 NW_024978047.1 20472 34780 - uncharacterized LOC122273642 aug3.g18684 NA 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02