Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447726 Ptep1.0/2.0 NW_024969606.1 1474516 1536728 - sortilin-related receptor aug3.g1894,aug3.g1895 LOC107447726 0
LOC107446134 Ptep1.0/2.0 NW_024970115.1 14228 31355 - uncharacterized LOC107446134 aug3.g18945 LOC107453488,LOC107446134 0
LOC107439796 Ptep1.0/2.0 NW_024970115.1 54156 74402 + uncharacterized LOC107439796 aug3.g14059,aug3.g18948,aug3.g18947 LOC107439796 0
LOC107446131 Ptep1.0/2.0 NW_024970180.1 546882 550655 + uncharacterized LOC107446131 aug3.g18944 LOC107446131 0
LOC107447169 Ptep1.0/2.0 NW_024970992.1 120473 155756 + calnexin aug3.g19585,aug3.g18943 LOC107447169 0
LOC107446127 Ptep1.0/2.0 NW_024971352.1 13437 50745 - fibropellin-1 aug3.g18941 LOC107446127 0
LOC122272119 Ptep1.0/2.0 NW_024971516.1 1 3422 + uncharacterized LOC122272119 aug3.g18941 NA 8e-80
LOC107446126 Ptep1.0/2.0 NW_024971516.1 7402 73987 + fibropellin-1 aug3.g14412,aug3.g18940 LOC107446126 0
LOC122268228 Ptep1.0/2.0 NW_024971774.1 38497 61546 - calnexin-like aug3.g18943 LOC107447169 0
LOC122273274 Ptep1.0/2.0 NW_024975147.1 4999 6304 - uncharacterized LOC122273274 aug3.g18945 NA 7e-109
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02