Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447775 Ptep1.0/2.0 NW_024969624.1 18601 38011 + uracil-DNA glycosylase aug3.g1916 LOC107447775 0
LOC122268862 Ptep1.0/2.0 NW_024969693.1 656189 657882 + uncharacterized LOC122268862 aug3.g19162 NA 1e-84
LOC107446442 Ptep1.0/2.0 NW_024969863.1 11992 31076 - uncharacterized protein NKAPD1 aug3.g19166 LOC107446442 0
LOC107436181 Ptep1.0/2.0 NW_024969863.1 31217 50370 + ribosomal RNA processing protein 1 homolog B aug3.g19165,aug3.g11359 LOC107436181 0
LOC107444278 Ptep1.0/2.0 NW_024970504.1 4144 89333 + serine-rich adhesin for platelets-like aug3.g19161,aug3.g21379,aug3.g24547,aug3.g21296 LOC107444278 0
LOC107451781 Ptep1.0/2.0 NW_024971038.1 75013 93509 + very low-density lipoprotein receptor-like aug3.g4298,aug3.g19169 LOC107451781 0
LOC107446443 Ptep1.0/2.0 NW_024971038.1 97710 120315 - uncharacterized protein MAL8P1.12-like aug3.g19168 LOC107446443 0
LOC107446439 Ptep1.0/2.0 NW_024971038.1 124264 158243 + nuclear pore membrane glycoprotein 210 aug3.g19167,aug3.g20612 LOC107446439 0
LOC122272578 Ptep1.0/2.0 NW_024972283.1 4601 5276 - uncharacterized LOC122272578 aug3.g19162 NA 0
LOC122272577 Ptep1.0/2.0 NW_024972283.1 20719 21448 - uncharacterized LOC122272577 aug3.g19162 NA 4e-146
LOC110283143 Ptep1.0/2.0 NW_024974005.1 2951 4201 - uncharacterized LOC110283143 aug3.g25281,aug3.g25280,aug3.g19162 LOC110283143 0
LOC122273658 Ptep1.0/2.0 NW_024978189.1 510 2837 - uncharacterized LOC122273658 aug3.g19162 NA 0
LOC122273787 Ptep1.0/2.0 NW_024980279.1 1645 2682 - uncharacterized LOC122273787 aug3.g19162 NA 0
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02