Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107447827 Ptep1.0/2.0 NW_024969791.1 139416 177029 + importin subunit beta-1 aug3.g1937 LOC107447827 0
LOC107441264 Ptep1.0/2.0 NW_024970048.1 582887 583528 - uncharacterized LOC107441264 aug3.g23368,aug3.g19373,aug3.g24892 LOC107441264 0
LOC107446776 Ptep1.0/2.0 NW_024970171.1 90059 93049 - GPI ethanolamine phosphate transferase 2 aug3.g19375 LOC107446776 0
LOC107446774 Ptep1.0/2.0 NW_024970171.1 93144 97990 + uncharacterized LOC107446774 aug3.g19376 LOC107446774 9e-146
LOC122270410 Ptep1.0/2.0 NW_024970171.1 100678 106359 + uncharacterized LOC122270410 aug3.g19376 NA 0
LOC107446775 Ptep1.0/2.0 NW_024970171.1 114601 149841 - probable C-mannosyltransferase DPY19L1 aug3.g19378,aug3.g19377 LOC107446775 0
LOC107446768 Ptep1.0/2.0 NW_024970433.1 309755 329931 - homocysteine S-methyltransferase 1 aug3.g19370,aug3.g6471 LOC107446768 0
LOC110282502 Ptep1.0/2.0 NW_024971080.1 55820 57095 - uncharacterized LOC110282502 aug3.g19379,aug3.g2276,aug3.g5504 LOC110282502 0
LOC107443530 Ptep1.0/2.0 NW_024971227.1 66211 68538 - isatin hydrolase-like aug3.g17294,aug3.g19372,aug3.g7981,aug3.g17296 LOC107443530 0
LOC107443531 Ptep1.0/2.0 NW_024971227.1 111194 113173 - kynurenine formamidase-like aug3.g17296,aug3.g19371 LOC107443531 0
LOC122268413 Ptep1.0/2.0 NW_024971564.1 67257 67501 - alpha-tocopherol transfer protein-like aug3.g19374 NA 0
LOC107446773 Ptep1.0/2.0 NW_024971921.1 4293 12973 + alpha-tocopherol transfer protein-like aug3.g19374 LOC107446773 0
LOC122272385 Ptep1.0/2.0 NW_024971921.1 24812 25614 + ribonuclease H-like aug3.g19373 NA 0
LOC122273208 Ptep1.0/2.0 NW_024974688.1 2751 4482 + uncharacterized LOC122273208 aug3.g19379 NA 0
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02