Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269824 Ptep1.0/2.0 NW_024969946.1 491950 751805 - transient receptor potential cation channel subfamily M member 3-like aug3.g2344,aug3.g19628,aug3.g19629 NA 0
LOC107447857 Ptep1.0/2.0 NW_024970047.1 249309 251104 - speckle-type POZ protein B-like aug3.g1962,aug3.g27593,aug3.g19033,aug3.g1961,aug3.g21829,aug3.g1963,aug3.g1964 LOC107447857 0
LOC122271588 Ptep1.0/2.0 NW_024970957.1 36856 100954 - uncharacterized LOC122271588 aug3.g19886,aug3.g19622 NA 0
LOC107447226 Ptep1.0/2.0 NW_024970957.1 113225 130126 - transmembrane protein 179B aug3.g19621 LOC107447226 0
LOC107447228 Ptep1.0/2.0 NW_024970957.1 136813 151598 + putative uncharacterized protein DDB_G0282133 aug3.g19620 LOC107447228 0
LOC107447231 Ptep1.0/2.0 NW_024971831.1 32009 38876 - uncharacterized protein CG3556-like aug3.g19625 LOC107447231 0
LOC107444639 Ptep1.0/2.0 NW_024971901.1 39739 47831 - uncharacterized protein CG3556-like aug3.g19625 LOC107444639 0
LOC107436916 Ptep1.0/2.0 NW_024972978.1 23737 26972 - probable serine/threonine-protein kinase DDB_G0284251 aug3.g11923,aug3.g17987,aug3.g17345,aug3.g25456,aug3.g19626,aug3.g15153 LOC107436916 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02