Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445367 Ptep1.0/2.0 NW_024969890.1 167759 218234 + nose resistant to fluoxetine protein 6-like aug3.g1032,aug3.g19705 LOC107447322,LOC107445367 0
LOC107447864 Ptep1.0/2.0 NW_024970047.1 500945 510929 - 40S ribosomal protein S15Aa aug3.g1970 LOC107447864 0
LOC107439174 Ptep1.0/2.0 NW_024970106.1 1480198 1507433 - S-adenosylmethionine sensor upstream of mTORC1 aug3.g26701,aug3.g19126,aug3.g2982,aug3.g27260,aug3.g11936,aug3.g23713,aug3.g2296,aug3.g22406,aug3.g8408,aug3.g22914,aug3.g21080,aug3.g20545,aug3.g3761,aug3.g4881,aug3.g19704,aug3.g16522,aug3.g5565,aug3.g11212,aug3.g25515,aug3.g3769,aug3.g3195,aug3.g26523 LOC107439174 0
LOC107450264 Ptep1.0/2.0 NW_024970239.1 53134 73145 - uncharacterized LOC107450264 aug3.g19707,aug3.g5557 LOC107450264 0
LOC107447317 Ptep1.0/2.0 NW_024970945.1 20495 34426 + TD and POZ domain-containing protein 2-like aug3.g19699,aug3.g19700,aug3.g19701 LOC107447317 0
LOC122271571 Ptep1.0/2.0 NW_024970945.1 24316 27560 + speckle-type POZ protein-like aug3.g19700 NA 0
LOC110282055 Ptep1.0/2.0 NW_024970945.1 39146 40961 + TD and POZ domain-containing protein 1-like aug3.g19700 LOC110282055 0
LOC107446654 Ptep1.0/2.0 NW_024970945.1 45666 87604 - cationic amino acid transporter 3 aug3.g10218,aug3.g19703,aug3.g19702 LOC107446654 0
LOC107447348 Ptep1.0/2.0 NW_024971731.1 11971 52918 + polyribonucleotide nucleotidyltransferase 1, mitochondrial aug3.g19707 LOC107447348 0
LOC107447353 Ptep1.0/2.0 NW_024971750.1 5921 9874 - uncharacterized LOC107447353 aug3.g19708 LOC107447353 0
LOC107447356 Ptep1.0/2.0 NW_024971750.1 14356 31619 + TWiK family of potassium channels protein 7 aug3.g19709 LOC107447356 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02