Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122270720 Ptep1.0/2.0 NW_024969630.1 2244985 2245404 - uncharacterized LOC122270720 aug3.g19808 NA 1e-164
LOC122269477 Ptep1.0/2.0 NW_024969830.1 101372 113541 + uncharacterized LOC122269477 aug3.g19808 NA 0
LOC107437831 Ptep1.0/2.0 NW_024970506.1 13680 20397 - uncharacterized LOC107437831 aug3.g19809,aug3.g9566 LOC107437831 0
LOC122271008 Ptep1.0/2.0 NW_024970506.1 23511 25915 - uncharacterized LOC122271008 aug3.g19809 NA 3e-152
LOC107447902 Ptep1.0/2.0 NW_024970795.1 1 2533 + uncharacterized LOC107447902 aug3.g1980 LOC107447902 0
LOC107447512 Ptep1.0/2.0 NW_024970841.1 128659 139461 + 60S ribosomal protein L28 aug3.g19800 LOC107447512 0
LOC107447523 Ptep1.0/2.0 NW_024971021.1 120203 129950 - uncharacterized LOC107447523 aug3.g19807 LOC107447523 3e-142
LOC107447521 Ptep1.0/2.0 NW_024971021.1 135387 142851 + uncharacterized LOC107447521 aug3.g19807,aug3.g6163 LOC107447521 0
LOC122271646 Ptep1.0/2.0 NW_024971021.1 138918 143547 - uncharacterized LOC122271646 aug3.g19807 NA 2e-143
LOC107447514 Ptep1.0/2.0 NW_024972815.1 13748 56340 - serine/threonine-protein kinase Pak aug3.g19801 LOC107447514 0
LOC122268488 Ptep1.0/2.0 NW_024994886.1 775 1263 + uncharacterized LOC122268488 aug3.g19808 NA 3e-62
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02