Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452422 Ptep1.0/2.0 NW_024969598.1 767869 793284 - short transient receptor potential channel 4-associated protein-like aug3.g21736,aug3.g20477 LOC107452422 0
LOC107448823 Ptep1.0/2.0 NW_024969598.1 807819 817503 + flap endonuclease 1 aug3.g20478 LOC107448823 0
LOC107448822 Ptep1.0/2.0 NW_024969598.1 822889 838074 + ubiquitin-conjugating enzyme E2 1 aug3.g20479 LOC107448822 0
LOC107448055 Ptep1.0/2.0 NW_024969602.1 294505 421644 - pro-epidermal growth factor aug3.g2047 LOC107448055 0
LOC107448811 Ptep1.0/2.0 NW_024969810.1 986729 999216 + uncharacterized LOC107448811 aug3.g20470 LOC107448811 0
LOC122271186 Ptep1.0/2.0 NW_024970630.1 26311 34396 - uncharacterized LOC122271186 aug3.g20474 NA 0
LOC107448814 Ptep1.0/2.0 NW_024971378.1 19501 28996 + histidine triad nucleotide-binding protein 3 aug3.g19637,aug3.g20473 LOC107447252,LOC107448814 0
LOC107448813 Ptep1.0/2.0 NW_024971655.1 16904 59932 - potassium channel subfamily K member 1 aug3.g20472 LOC107448813 0
LOC107448819 Ptep1.0/2.0 NW_024971658.1 425 1433 + uncharacterized protein K02A2.6-like aug3.g20476 LOC107448819 8e-172
LOC107448818 Ptep1.0/2.0 NW_024971658.1 1520 3716 + uncharacterized protein K02A2.6-like aug3.g20476,aug3.g23584,aug3.g4389 LOC107448818 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02