Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442231 Ptep1.0/2.0 NW_024969650.1 503170 644233 + uncharacterized LOC107442231 aug3.g27564,aug3.g20669,aug3.g20671 LOC107442231 0
LOC107449283 Ptep1.0/2.0 NW_024969650.1 592769 595474 + uncharacterized LOC107449283 aug3.g20670 LOC107449283 4e-114
LOC110283475 Ptep1.0/2.0 NW_024969650.1 608634 612484 + uncharacterized LOC110283475 aug3.g20670 LOC110283475 0
LOC107449285 Ptep1.0/2.0 NW_024969876.1 921733 939384 + ribosomal L1 domain-containing protein 1 aug3.g20672,aug3.g12041 LOC107449285 0
LOC107448083 Ptep1.0/2.0 NW_024970074.1 532675 553228 - procathepsin L aug3.g2067 LOC107448083 0
LOC107449299 Ptep1.0/2.0 NW_024970703.1 15510 46796 - CD9 antigen aug3.g20676,aug3.g20677,aug3.g18179 LOC107449299 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02