Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443403 Ptep1.0/2.0 NW_024969614.1 1688777 1758375 - polyamine-transporting ATPase 13A3 aug3.g27957,aug3.g21140 LOC107443403 0
LOC107450214 Ptep1.0/2.0 NW_024969616.1 2882704 2910087 + cyclin-dependent kinase 8 aug3.g21134,aug3.g16093 LOC107441759,LOC107450214 0
LOC107450212 Ptep1.0/2.0 NW_024969616.1 2921796 2927265 + peptidoglycan recognition protein 1-like aug3.g21135 LOC107450212 0
LOC107448180 Ptep1.0/2.0 NW_024969692.1 13044 25276 - uncharacterized LOC107448180 aug3.g2117 LOC107448180 0
LOC107448178 Ptep1.0/2.0 NW_024969692.1 39549 41235 - RNA pseudouridylate synthase domain-containing protein 1 aug3.g2118 LOC107448178 0
LOC107448191 Ptep1.0/2.0 NW_024969692.1 42308 81951 + girdin aug3.g2119,aug3.g2120 LOC107448191 0
LOC107441090 Ptep1.0/2.0 NW_024969696.1 264621 335738 + endosome/lysosome-associated apoptosis and autophagy regulator family member 2 aug3.g27202,aug3.g27203,aug3.g21155 LOC107441090,LOC107450326 0
LOC122268903 Ptep1.0/2.0 NW_024969701.1 1248926 1255058 + uncharacterized LOC122268903 aug3.g25401,aug3.g14099,aug3.g5419,aug3.g18854,aug3.g21120,aug3.g24107,aug3.g17828 NA 0
LOC107448010 Ptep1.0/2.0 NW_024969705.1 298839 327251 + putative leucine-rich repeat-containing protein DDB_G0290503 aug3.g20091,aug3.g21152 LOC107450322,LOC107448010 0
LOC107457181 Ptep1.0/2.0 NW_024969714.1 1242167 1273702 + ATP-binding cassette sub-family D member 3 aug3.g9167,aug3.g21159 LOC107457181 0
LOC107450168 Ptep1.0/2.0 NW_024969741.1 774598 789441 + pancreatic alpha-amylase aug3.g21109,aug3.g22253 LOC107450168 0
LOC107451030 Ptep1.0/2.0 NW_024969755.1 393287 429793 - proton channel OtopLc aug3.g211 LOC107451030 0
LOC107455976 Ptep1.0/2.0 NW_024969801.1 3813036 3823388 - mitochondrial dimethyladenosine transferase 1 aug3.g8188,aug3.g21190 LOC107455976 0
LOC107450421 Ptep1.0/2.0 NW_024969801.1 3927996 3931755 + DNA-binding protein inhibitor ID-2 aug3.g21189 LOC107450421 0
LOC107450193 Ptep1.0/2.0 NW_024969807.1 836274 842022 - cyclin-dependent kinase-like 1 aug3.g21119 LOC107450193 0
LOC107450399 Ptep1.0/2.0 NW_024969819.1 1955747 1971788 + uncharacterized LOC107450399 aug3.g21176 LOC107450399 5e-140
LOC107450415 Ptep1.0/2.0 NW_024969828.1 1000667 1002235 - rhomboid-related protein 4-like aug3.g21187,aug3.g19855,aug3.g21185 LOC107450415 0
LOC107447581 Ptep1.0/2.0 NW_024969828.1 1002373 1005004 + Fanconi anemia group J protein homolog aug3.g19856,aug3.g21184,aug3.g21186 LOC107447581 0
LOC107450163 Ptep1.0/2.0 NW_024969831.1 1015584 1038919 + serine/threonine-protein kinase 16 aug3.g21104,aug3.g26780 LOC107450163 0
LOC110282312 Ptep1.0/2.0 NW_024969861.1 758240 762755 - oocyte zinc finger protein XlCOF15-like aug3.g21125 LOC110282312 1e-31
LOC122269553 Ptep1.0/2.0 NW_024969861.1 776916 783952 - uncharacterized LOC122269553 aug3.g21126 NA 5e-89
LOC107450197 Ptep1.0/2.0 NW_024969861.1 805000 808712 - uncharacterized LOC107450197 aug3.g21127 LOC107450197 0
LOC107443897 Ptep1.0/2.0 NW_024969868.1 855775 859774 - sulfotransferase ssu-1 aug3.g17536,aug3.g18898,aug3.g18897,aug3.g21148 LOC107443897 0
LOC107436281 Ptep1.0/2.0 NW_024969872.1 559143 593349 - dnaJ homolog subfamily C member 11 aug3.g11430,aug3.g21142 LOC107450257,LOC107436281 0
LOC107450256 Ptep1.0/2.0 NW_024969872.1 593459 646331 + cotranscriptional regulator FAM172A homolog aug3.g21141 LOC107450256 0
LOC107443006 Ptep1.0/2.0 NW_024969891.1 635818 654564 - tigger transposable element-derived protein 4-like aug3.g9934,aug3.g10105,aug3.g18192,aug3.g6186,aug3.g17788,aug3.g9969,aug3.g192,aug3.g12457,aug3.g22897,aug3.g1740,aug3.g20926,aug3.g19047,aug3.g14633,aug3.g5371,aug3.g25913,aug3.g21109,aug3.g9935,aug3.g1678,aug3.g15883,aug3.g21072,aug3.g10535,aug3.g13475, LOC107443006 0
LOC107456872 Ptep1.0/2.0 NW_024969914.1 245569 252506 - uncharacterized LOC107456872 aug3.g8892,aug3.g21199 LOC107456872 0
LOC107450801 Ptep1.0/2.0 NW_024969922.1 535349 536866 - uncharacterized LOC107450801 aug3.g3619,aug3.g21113 LOC107450801 0
LOC107452805 Ptep1.0/2.0 NW_024969951.1 11707 34576 - tubulin polyglutamylase TTLL6-like aug3.g23649,aug3.g21111 LOC107452805 0
LOC107450178 Ptep1.0/2.0 NW_024969962.1 612705 642966 - protein SSUH2 homolog aug3.g21116,aug3.g8259 LOC107450178,LOC107456046 0
LOC122269947 Ptep1.0/2.0 NW_024969991.1 618832 622985 - uncharacterized LOC122269947 aug3.g21177 NA 0
LOC107443738 Ptep1.0/2.0 NW_024969993.1 43381 53291 - uncharacterized LOC107443738 aug3.g17435,aug3.g21192 LOC107443738 0
LOC107450364 Ptep1.0/2.0 NW_024969995.1 382660 397875 - uncharacterized LOC107450364 aug3.g21168,aug3.g15925 LOC107450364 0
LOC107437086 Ptep1.0/2.0 NW_024970056.1 569917 591996 + solute carrier organic anion transporter family member 4A1 aug3.g12031,aug3.g21172 LOC107437086,LOC107450376 0
LOC107450194 Ptep1.0/2.0 NW_024970128.1 502540 553252 - glucosidase 2 subunit beta aug3.g21121,aug3.g21122 LOC107450194 0
LOC107450414 Ptep1.0/2.0 NW_024970145.1 483174 512832 + alkylglycerol monooxygenase aug3.g7729,aug3.g21183 LOC107450414 0
LOC107450208 Ptep1.0/2.0 NW_024970149.1 157386 177537 - vacuolar protein sorting-associated protein 45 aug3.g21132,aug3.g14236 LOC107450208 0
LOC107450209 Ptep1.0/2.0 NW_024970149.1 195023 195892 - oocyte zinc finger protein XlCOF19 aug3.g21129 LOC107450209 7e-100
LOC107450210 Ptep1.0/2.0 NW_024970149.1 196430 198682 + zinc finger protein 83-like aug3.g21129 LOC107450210 0
LOC107450347 Ptep1.0/2.0 NW_024970171.1 50155 66013 - tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like aug3.g21161 LOC107447879,LOC107450347 0
LOC107450348 Ptep1.0/2.0 NW_024970171.1 66164 84726 + uncharacterized LOC107450348 aug3.g21162 LOC107450348 0
LOC122270412 Ptep1.0/2.0 NW_024970171.1 84979 87881 + uncharacterized LOC122270412 aug3.g21162 NA 0
LOC107441218 Ptep1.0/2.0 NW_024970176.1 331284 347495 + protein ABHD11 aug3.g15140,aug3.g21101 LOC107441218 0
LOC107450160 Ptep1.0/2.0 NW_024970176.1 350363 362941 - protein ABHD11-like aug3.g21102 LOC107450160 0
LOC107436832 Ptep1.0/2.0 NW_024970222.1 468443 529159 - nose resistant to fluoxetine protein 6-like aug3.g11862,aug3.g11863,aug3.g24399,aug3.g21164 LOC107436832,LOC107456990 0
LOC107450167 Ptep1.0/2.0 NW_024970279.1 8452 44693 + nuclear valosin-containing protein-like aug3.g21108 LOC107450167 0
LOC107450166 Ptep1.0/2.0 NW_024970279.1 46003 98791 - histone deacetylase 4 aug3.g21108,aug3.g21107,aug3.g16208 LOC107450166 0
LOC107450426 Ptep1.0/2.0 NW_024970335.1 26248 62903 - uncharacterized LOC107450426 aug3.g21198,aug3.g21197,aug3.g23025,aug3.g13838 LOC110282465,LOC107450426 0
LOC107452947 Ptep1.0/2.0 NW_024970365.1 31463 74105 - sulfate transporter aug3.g5105,aug3.g5104,aug3.g21158 LOC107452947 0
LOC107451836 Ptep1.0/2.0 NW_024970394.1 3288 21785 - DNA polymerase alpha subunit B-like aug3.g21188,aug3.g4332 LOC107451836 0
LOC107450404 Ptep1.0/2.0 NW_024970478.1 204432 234580 - uncharacterized LOC107450404 aug3.g21179 LOC107450404 0
LOC122270960 Ptep1.0/2.0 NW_024970478.1 234666 269270 + uncharacterized LOC122270960 aug3.g21180 LOC107445802 0
LOC110282546 Ptep1.0/2.0 NW_024970580.1 201995 247009 + serine/threonine-protein phosphatase CPPED1-like aug3.g21175 LOC110282546 4e-148
LOC107441248 Ptep1.0/2.0 NW_024970580.1 215173 257025 - sulfotransferase ssu-1 aug3.g21174 LOC107441248 0
LOC110283501 Ptep1.0/2.0 NW_024970593.1 48151 49095 + E3 ubiquitin-protein ligase makorin-1-like aug3.g15148,aug3.g21170,aug3.g15150 LOC110283501 0
LOC107450360 Ptep1.0/2.0 NW_024970636.1 70830 104367 - uncharacterized LOC107450360 aug3.g21165,aug3.g21166 LOC107450361,LOC107450360 0
LOC107444761 Ptep1.0/2.0 NW_024970653.1 165051 226414 - carnitine O-palmitoyltransferase 1, liver isoform aug3.g18084,aug3.g21178 LOC107444761,LOC110282898 0
LOC107448172 Ptep1.0/2.0 NW_024970710.1 3879 9869 - carbonic anhydrase 9-like aug3.g2110 LOC107448172 0
LOC107448173 Ptep1.0/2.0 NW_024970710.1 28995 43222 - carbonic anhydrase 7-like aug3.g2112,aug3.g2111 LOC107448173 0
LOC107448177 Ptep1.0/2.0 NW_024970710.1 59451 75139 - carbonic anhydrase 7 aug3.g2112 LOC107448177 0
LOC107448182 Ptep1.0/2.0 NW_024970710.1 129922 210129 + uncharacterized LOC107448182 aug3.g2114 LOC107448182 0
LOC107448187 Ptep1.0/2.0 NW_024970710.1 220989 232775 - autophagy-related protein 16-1 aug3.g2115 LOC107448187 0
LOC107448174 Ptep1.0/2.0 NW_024970710.1 233013 250093 + beclin 1-associated autophagy-related key regulator aug3.g2116 LOC107448174 0
LOC122271307 Ptep1.0/2.0 NW_024970710.1 250201 252751 - uncharacterized LOC122271307 aug3.g2117 NA 9e-150
LOC107443139 Ptep1.0/2.0 NW_024970712.1 79944 134508 + trafficking protein particle complex subunit 8 aug3.g17041,aug3.g21154 LOC107443139 0
LOC107450323 Ptep1.0/2.0 NW_024970712.1 144147 214314 - F-box/LRR-repeat protein 12 aug3.g21153 LOC107450323 0
LOC107450165 Ptep1.0/2.0 NW_024970720.1 125495 167785 - cubilin aug3.g17021,aug3.g21105 LOC107450165 0
LOC107440081 Ptep1.0/2.0 NW_024970791.1 10815 34155 - 40S ribosomal protein S4 aug3.g14256,aug3.g21157 LOC107440081 0
LOC107445852 Ptep1.0/2.0 NW_024971035.1 74278 128984 + Down syndrome cell adhesion molecule aug3.g18799,aug3.g21115,aug3.g21963 LOC107445852 0
LOC122271685 Ptep1.0/2.0 NW_024971055.1 60219 67985 - uncharacterized LOC122271685 aug3.g21107 LOC107447742 3e-118
LOC107455215 Ptep1.0/2.0 NW_024971064.1 67039 96783 - 28S ribosomal protein S31, mitochondrial aug3.g21191,aug3.g10862 LOC107455215 0
LOC107447307 Ptep1.0/2.0 NW_024971214.1 14262 18868 + uncharacterized LOC107447307 aug3.g21167 LOC107447307 0
LOC107450156 Ptep1.0/2.0 NW_024971350.1 8654 89962 - NF-X1-type zinc finger protein NFXL1 aug3.g21100 LOC107450156 0
LOC107451254 Ptep1.0/2.0 NW_024971417.1 59368 90192 + cyclin-dependent kinase 8-like aug3.g21134,aug3.g3892 LOC107451254 0
LOC107446041 Ptep1.0/2.0 NW_024971665.1 373 10677 - sulfotransferase 1 family member D1-like aug3.g18896,aug3.g21149 LOC107446041 0
LOC107450358 Ptep1.0/2.0 NW_024971959.1 571 25500 + pancreatic triacylglycerol lipase-like aug3.g21164 LOC107450358 0
LOC122272445 Ptep1.0/2.0 NW_024972021.1 849 14145 - pancreatic triacylglycerol lipase-like aug3.g21164 NA 0
LOC107436915 Ptep1.0/2.0 NW_024972270.1 3714 8048 - cyclin-dependent kinase-like 4 aug3.g11923,aug3.g10790,aug3.g2348,aug3.g5240,aug3.g10289,aug3.g21119,aug3.g1614,aug3.g13895,aug3.g13894 LOC107436915 0
LOC122268231 Ptep1.0/2.0 NW_024972450.1 5476 23559 - vacuolar protein sorting-associated protein 45-like aug3.g21132 LOC107450208 0
LOC107443515 Ptep1.0/2.0 NW_024972486.1 4559 20081 + putative uncharacterized protein DDB_G0282129 aug3.g17277,aug3.g99,aug3.g21144 LOC107443515 0
LOC107450374 Ptep1.0/2.0 NW_024972637.1 52 550 + putative E3 ubiquitin-protein ligase makorin-4 aug3.g21169 LOC107450374 0
LOC110283330 Ptep1.0/2.0 NW_024972665.1 10652 15547 + uncharacterized LOC110283330 aug3.g21167,aug3.g11138 LOC110283330 0
LOC107450402 Ptep1.0/2.0 NW_024972706.1 9896 21873 - uncharacterized LOC107450402 aug3.g21177 LOC107450402 0
LOC122272805 Ptep1.0/2.0 NW_024972888.1 12630 18437 - uncharacterized LOC122272805 aug3.g11583,aug3.g19779,aug3.g2113 NA 0
LOC122272833 Ptep1.0/2.0 NW_024972988.1 4590 5087 + uncharacterized LOC122272833 aug3.g21195,aug3.g18030,aug3.g1775,aug3.g3151,aug3.g18048,aug3.g11229,aug3.g13917,aug3.g23670,aug3.g101,aug3.g5304,aug3.g2007,aug3.g4720,aug3.g1160,aug3.g18760,aug3.g4669 NA 0
LOC107450416 Ptep1.0/2.0 NW_024976059.1 2905 5259 - Fanconi anemia group J protein homolog aug3.g21184 LOC107450416 0
LOC122273462 Ptep1.0/2.0 NW_024976298.1 3560 4615 - uncharacterized LOC122273462 aug3.g2119 LOC107448191 1e-64
LOC122273700 Ptep1.0/2.0 NW_024978800.1 554 2638 + uncharacterized LOC122273700 aug3.g21167 LOC107450363 1e-79
LOC107443240 Ptep1.0/2.0 NW_024979215.1 1467 2780 - E3 ubiquitin-protein ligase makorin-1-like aug3.g17113,aug3.g21169 LOC107443240 0
LOC122273917 Ptep1.0/2.0 NW_024983294.1 52 2296 + uncharacterized LOC122273917 aug3.g21108 NA 1e-92
90 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02