Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448231 Ptep1.0/2.0 NW_024969610.1 918528 949618 + uncharacterized LOC107448231 aug3.g2140 LOC107448231 0
LOC107449326 Ptep1.0/2.0 NW_024969936.1 404909 419967 - ras-related GTP-binding protein A aug3.g20696,aug3.g21409 LOC107449326 0
LOC107451842 Ptep1.0/2.0 NW_024970394.1 339193 388527 - peroxidase aug3.g4351,aug3.g21406 LOC107451842,LOC107451115 0
LOC107451113 Ptep1.0/2.0 NW_024970487.1 281367 305908 - F-box/LRR-repeat protein 4 aug3.g21402 LOC107451113 0
LOC107451112 Ptep1.0/2.0 NW_024970487.1 306084 327401 + actin-related protein 2/3 complex subunit 2 aug3.g21403 LOC107451112 0
LOC122271870 Ptep1.0/2.0 NW_024971243.1 50747 56920 - uncharacterized LOC122271870 aug3.g20316,aug3.g21404 NA 0
LOC122272710 Ptep1.0/2.0 NW_024972576.1 18439 21463 - uncharacterized LOC122272710 aug3.g21404 NA 0
LOC122273760 Ptep1.0/2.0 NW_024979772.1 629 1121 + uncharacterized LOC122273760 aug3.g21408 NA 2e-105
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02