Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448222 Ptep1.0/2.0 NW_024969610.1 403398 458612 + serine/threonine-protein kinase PLK4 aug3.g2156 LOC107448222,LOC107448221 0
LOC107451671 Ptep1.0/2.0 NW_024969746.1 1381085 1395454 + uncharacterized LOC107451671 aug3.g21563 LOC107451671 0
LOC122269717 Ptep1.0/2.0 NW_024969905.1 14822 16388 - tigger transposable element-derived protein 4-like aug3.g21568 NA 1e-114
LOC122270029 Ptep1.0/2.0 NW_024970020.1 164637 165886 - tigger transposable element-derived protein 4-like aug3.g21568 NA 1e-91
LOC122270554 Ptep1.0/2.0 NW_024970237.1 48365 49669 - tigger transposable element-derived protein 4-like aug3.g21568 NA 1e-114
LOC107451886 Ptep1.0/2.0 NW_024970561.1 200536 219835 - hairy/enhancer-of-split related with YRPW motif protein aug3.g4372,aug3.g21564 LOC107451886 0
LOC122271577 Ptep1.0/2.0 NW_024970947.1 164077 166285 + tigger transposable element-derived protein 4-like aug3.g21568 NA 5e-131
LOC107448467 Ptep1.0/2.0 NW_024971090.1 121923 141120 - serine--tRNA ligase, mitochondrial aug3.g5080,aug3.g20300,aug3.g21584,aug3.g21568 LOC107448467 0
LOC122274006 Ptep1.0/2.0 NW_024986702.1 106 610 - uncharacterized LOC122274006 aug3.g2156 NA 5e-118
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02