Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC110282210 Ptep1.0/2.0 NW_024969629.1 1251564 1253988 - speckle-type POZ protein B aug3.g21829 LOC110282210 0
LOC107449958 Ptep1.0/2.0 NW_024969687.1 2486439 2497656 + proton-coupled folate transporter aug3.g21025,aug3.g21821 LOC107449958 0
LOC107452881 Ptep1.0/2.0 NW_024969804.1 396675 401576 + NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 aug3.g21820 LOC107452881 1e-119
LOC107456816 Ptep1.0/2.0 NW_024969896.1 813861 823404 - uncharacterized LOC107456816 aug3.g21820 LOC107456816 1e-30
LOC107448376 Ptep1.0/2.0 NW_024970018.1 363259 382396 + ubiquitin-conjugating enzyme E2 C aug3.g2182 LOC107448376 0
LOC107447857 Ptep1.0/2.0 NW_024970047.1 249309 251104 - speckle-type POZ protein B-like aug3.g1962,aug3.g27593,aug3.g19033,aug3.g1961,aug3.g21829,aug3.g1963,aug3.g1964 LOC107447857 0
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02