Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437063 Ptep1.0/2.0 NW_024969598.1 1057011 1066977 + pinin aug3.g12013,aug3.g23061 LOC107437063 0
LOC107447671 Ptep1.0/2.0 NW_024969609.1 2634820 2659919 - tRNA pseudouridine synthase A aug3.g15188,aug3.g23015 LOC107447671 0
LOC107437828 Ptep1.0/2.0 NW_024969625.1 154762 162665 + UPF0462 protein C4orf33-like aug3.g23068,aug3.g25521 LOC107437828 0
LOC107454787 Ptep1.0/2.0 NW_024969667.1 905173 967881 - brefeldin A-inhibited guanine nucleotide-exchange protein 3 aug3.g6540,aug3.g23032 LOC107437281,LOC107454787 0
LOC107437524 Ptep1.0/2.0 NW_024969708.1 3477144 3495407 + homeobox protein HMX3-B-like aug3.g26282,aug3.g23073 LOC107437524 0
LOC122269054 Ptep1.0/2.0 NW_024969724.1 1186368 1187081 - uncharacterized LOC122269054 aug3.g23084 NA 0
LOC122269084 Ptep1.0/2.0 NW_024969733.1 904102 905692 - tigger transposable element-derived protein 4-like aug3.g23090 NA 0
LOC107444627 Ptep1.0/2.0 NW_024969753.1 67761 145593 - probable chitinase 10 aug3.g782,aug3.g781,aug3.g23030 LOC107437242,LOC107444627 0
LOC107451029 Ptep1.0/2.0 NW_024969755.1 1266324 1315149 - WASH complex subunit 4 aug3.g230 LOC107451029 0
LOC107444016 Ptep1.0/2.0 NW_024969765.1 348765 408470 - uncharacterized LOC107444016 aug3.g17613,aug3.g23084,aug3.g5536,aug3.g715,aug3.g12559,aug3.g4135,aug3.g10940,aug3.g27929,aug3.g11329,aug3.g5784,aug3.g21693,aug3.g18243,aug3.g1982,aug3.g24226,aug3.g7007,aug3.g691,aug3.g4537,aug3.g23563,aug3.g20932,aug3.g1220,aug3.g2490,aug3.g14337,aug LOC107444016,LOC107438385 0
LOC107454939 Ptep1.0/2.0 NW_024969823.1 2121102 2183336 + phospholipid-transporting ATPase ABCA1 aug3.g6702,aug3.g23035 LOC107454939 0
LOC122269487 Ptep1.0/2.0 NW_024969833.1 815306 819851 - uncharacterized LOC122269487 aug3.g23011 LOC107455057 1e-96
LOC107448578 Ptep1.0/2.0 NW_024969842.1 34881 89584 + uncharacterized LOC107448578 aug3.g2300 LOC107448578 0
LOC107443388 Ptep1.0/2.0 NW_024969857.1 273348 279005 + tetratricopeptide repeat protein 19 homolog, mitochondrial aug3.g17193,aug3.g23093 LOC107443388 0
LOC107451423 Ptep1.0/2.0 NW_024969865.1 530797 648333 + hemicentin-1 aug3.g15713,aug3.g23075 LOC107451424,LOC107451423,LOC107437848 0
LOC107437182 Ptep1.0/2.0 NW_024970062.1 538241 552266 + protein ABHD11 aug3.g23022 LOC107437182 0
LOC122270609 Ptep1.0/2.0 NW_024970273.1 94900 95520 + uncharacterized LOC122270609 aug3.g23084 NA 0
LOC107448564 Ptep1.0/2.0 NW_024970280.1 2 60532 + uncharacterized LOC107448564 aug3.g2305 LOC107448564 0
LOC107448563 Ptep1.0/2.0 NW_024970280.1 151404 332901 + uncharacterized LOC107448563 aug3.g2304 LOC107448563 0
LOC107438066 Ptep1.0/2.0 NW_024970288.1 397341 402147 + uncharacterized LOC107438066 aug3.g3482,aug3.g23092,aug3.g22513,aug3.g8392 LOC107438066 0
LOC122270639 Ptep1.0/2.0 NW_024970294.1 347778 352293 + uncharacterized LOC122270639 aug3.g303,aug3.g23083 NA 0
LOC107450426 Ptep1.0/2.0 NW_024970335.1 26248 62903 - uncharacterized LOC107450426 aug3.g21198,aug3.g21197,aug3.g23025,aug3.g13838 LOC110282465,LOC107450426 0
LOC107448631 Ptep1.0/2.0 NW_024970354.1 74761 80201 + leucine-rich PPR motif-containing protein, mitochondrial aug3.g2309 LOC107448631 0
LOC107448642 Ptep1.0/2.0 NW_024970354.1 95934 125752 - integrator complex subunit 9 aug3.g2308 LOC107448642 0
LOC107448643 Ptep1.0/2.0 NW_024970354.1 125607 142420 + protein disulfide-isomerase A6 homolog aug3.g2307 LOC107448643 0
LOC107448639 Ptep1.0/2.0 NW_024970354.1 148109 155983 - uncharacterized LOC107448639 aug3.g2306 LOC107448639 0
LOC107440302 Ptep1.0/2.0 NW_024970424.1 120021 126481 - protein TRC8 homolog aug3.g23037 LOC107440302 6e-25
LOC107456566 Ptep1.0/2.0 NW_024970450.1 86574 113266 + uncharacterized LOC107456566 aug3.g8663,aug3.g23039 LOC107456566 0
LOC107449942 Ptep1.0/2.0 NW_024970474.1 157503 225412 - spectrin alpha chain aug3.g3038,aug3.g3037,aug3.g23046 LOC107449942 0
LOC107444865 Ptep1.0/2.0 NW_024970627.1 17900 34158 + adhesion G-protein coupled receptor D1 aug3.g16161,aug3.g23026 LOC107444865,LOC107441813 0
LOC107451216 Ptep1.0/2.0 NW_024970635.1 112470 123927 - F-box only protein 43 aug3.g10565,aug3.g23000 LOC107451216 0
LOC107437177 Ptep1.0/2.0 NW_024970636.1 124742 152224 - myeloid differentiation primary response protein MyD88 aug3.g12679,aug3.g23017,aug3.g17480 LOC107437177,LOC107437932 0
LOC107454926 Ptep1.0/2.0 NW_024970708.1 205351 232208 + bcl-2-like protein 1 aug3.g23010,aug3.g6695,aug3.g6694 LOC107454925,LOC107454926 0
LOC107452025 Ptep1.0/2.0 NW_024970886.1 99212 179374 + Down syndrome cell adhesion molecule-like protein 1 homolog aug3.g4457,aug3.g23009 LOC107452025 0
LOC122271602 Ptep1.0/2.0 NW_024970971.1 87165 87695 - uncharacterized LOC122271602 aug3.g23078 NA 0
LOC107438000 Ptep1.0/2.0 NW_024971030.1 133405 161600 - uncharacterized LOC107438000 aug3.g15814,aug3.g23088 LOC107438000 0
LOC107447755 Ptep1.0/2.0 NW_024971253.1 38522 111289 - uncharacterized LOC107447755 aug3.g23076,aug3.g19950,aug3.g26462,aug3.g19951,aug3.g19949,aug3.g19947,aug3.g23507,aug3.g20843 LOC107447755 0
LOC107437902 Ptep1.0/2.0 NW_024971348.1 21334 47325 - A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like aug3.g23077,aug3.g17728 LOC107437902 0
LOC107441917 Ptep1.0/2.0 NW_024971843.1 25392 113683 - paramyosin aug3.g16258,aug3.g23006,aug3.g19654 LOC107441917 0
LOC107437173 Ptep1.0/2.0 NW_024972585.1 11892 14491 + uncharacterized LOC107437173 aug3.g23014 LOC107437173 0
LOC107437172 Ptep1.0/2.0 NW_024972585.1 15893 19648 - uncharacterized LOC107437172 aug3.g23013 LOC107437172 0
LOC122273450 Ptep1.0/2.0 NW_024976190.1 7 4753 + hemicentin-1-like aug3.g23075 LOC107451423 0
LOC122273730 Ptep1.0/2.0 NW_024979213.1 7 2783 + A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like aug3.g23077 NA 3e-144
LOC107437426 Ptep1.0/2.0 NW_024983292.1 762 1953 - uncharacterized LOC107437426 aug3.g23038 LOC107437426 0
44 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02