Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448634 Ptep1.0/2.0 NW_024970023.1 583277 616667 + dermonecrotic toxin LcsSicTox-betaIC1 aug3.g2312 LOC107448634 0
LOC107438388 Ptep1.0/2.0 NW_024970222.1 443426 455659 - uncharacterized LOC107438388 aug3.g11862,aug3.g23127 LOC107438388 0
LOC107456418 Ptep1.0/2.0 NW_024970807.1 169374 215497 - uncharacterized LOC107456418 aug3.g8545,aug3.g8546,aug3.g23121 LOC107456418 0
LOC107438401 Ptep1.0/2.0 NW_024970928.1 205513 211411 + cuticle protein 14 aug3.g11075,aug3.g23129 LOC107438401 0
LOC107438360 Ptep1.0/2.0 NW_024971083.1 1822 71262 + collagen alpha-1(I) chain-like aug3.g18742,aug3.g27690,aug3.g27691,aug3.g23123 LOC107438360 0
LOC122272783 Ptep1.0/2.0 NW_024972823.1 1976 9189 + uncharacterized LOC122272783 aug3.g23128 NA 0
LOC107438389 Ptep1.0/2.0 NW_024972823.1 9288 9803 + protein translocase subunit SecA 2-like aug3.g23128,aug3.g21635,aug3.g20741,aug3.g25945 LOC107438389 0
LOC122268609 Ptep1.0/2.0 NW_025005786.1 14 958 - uncharacterized LOC122268609 aug3.g23123 NA 1e-76
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02