Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451992 Ptep1.0/2.0 NW_024969863.1 300576 308968 - uncharacterized LOC107451992 aug3.g23519 LOC107451992 0
LOC107456849 Ptep1.0/2.0 NW_024969914.1 469615 509651 + protein Skeletor, isoforms B/C aug3.g8880,aug3.g23511 LOC107456849 0
LOC107448689 Ptep1.0/2.0 NW_024969946.1 192176 212846 + kelch domain-containing protein 4 aug3.g2351 LOC107448689 0
LOC122272715 Ptep1.0/2.0 NW_024972595.1 9507 16131 + uncharacterized LOC122272715 aug3.g13034,aug3.g23515 NA 0
LOC122274095 Ptep1.0/2.0 NW_024991803.1 349 1408 - uncharacterized LOC122274095 aug3.g7024,aug3.g14222,aug3.g12845,aug3.g15728,aug3.g24559,aug3.g5964,aug3.g23517 NA 0
5 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02