Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451998 Ptep1.0/2.0 NW_024969802.1 597886 673417 - atrial natriuretic peptide receptor 2-like aug3.g23539 LOC107451998,LOC107454998 0
LOC107452015 Ptep1.0/2.0 NW_024969802.1 691201 717244 - elongation of very long chain fatty acids protein AAEL008004 aug3.g23537 LOC107452015 0
LOC107452017 Ptep1.0/2.0 NW_024969802.1 802366 864108 + elongation of very long chain fatty acids protein 1 aug3.g22702,aug3.g23536 LOC107452017,LOC110282660 0
LOC107452004 Ptep1.0/2.0 NW_024969802.1 869662 886257 - 40S ribosomal protein S20 aug3.g23535 LOC107452004 0
LOC107452012 Ptep1.0/2.0 NW_024969802.1 891279 913485 + uncharacterized LOC107452012 aug3.g23534 LOC107452012,LOC107452011 0
LOC107451997 Ptep1.0/2.0 NW_024969802.1 922573 1073010 - synaptotagmin-12 aug3.g23533 LOC107451997 0
LOC107452014 Ptep1.0/2.0 NW_024969863.1 783701 824786 - origin recognition complex subunit 3 aug3.g23530 LOC107452014 0
LOC107452006 Ptep1.0/2.0 NW_024969863.1 833764 911467 - transcription factor AP-2-beta aug3.g23531 LOC107452006 0
LOC107448692 Ptep1.0/2.0 NW_024969946.1 152556 160576 + flavin-containing monooxygenase FMO GS-OX-like 2 aug3.g2353 LOC107448692 0
LOC107445205 Ptep1.0/2.0 NW_024970894.1 341507 342953 + uncharacterized LOC107445205 aug3.g18375,aug3.g25672,aug3.g27075,aug3.g22895,aug3.g105,aug3.g10018,aug3.g23538,aug3.g2742,aug3.g22145,aug3.g23491,aug3.g25313 LOC107445205 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02