Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107448725 Ptep1.0/2.0 NW_024969616.1 1090543 1177625 + histone-lysine N-methyltransferase trithorax aug3.g2380,aug3.g2379 LOC110281963,LOC110281955,LOC107448725 0
LOC107453375 Ptep1.0/2.0 NW_024969758.1 60496 105377 + uncharacterized LOC107453375 aug3.g23801 LOC107453375 0
LOC107453367 Ptep1.0/2.0 NW_024969758.1 129772 150905 + endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase aug3.g23802 LOC107453367 0
LOC107453355 Ptep1.0/2.0 NW_024969758.1 156623 198967 - uncharacterized LOC107453355 aug3.g23803 LOC107453355 0
LOC107453378 Ptep1.0/2.0 NW_024969758.1 220421 275095 - potassium voltage-gated channel protein eag aug3.g23804 LOC107453378 0
LOC122269197 Ptep1.0/2.0 NW_024969758.1 318327 321004 + uncharacterized LOC122269197 aug3.g23805 NA 1e-120
LOC107453363 Ptep1.0/2.0 NW_024969758.1 320757 415988 - glutamate receptor ionotropic, kainate 2 aug3.g23805 LOC107453363 0
LOC107453365 Ptep1.0/2.0 NW_024969758.1 371166 391224 + sodium-dependent phosphate transporter 1-A aug3.g23806 LOC107453365 0
LOC107453380 Ptep1.0/2.0 NW_024969758.1 395242 436836 + putative polypeptide N-acetylgalactosaminyltransferase 10 aug3.g23807 LOC107453380 0
LOC107453356 Ptep1.0/2.0 NW_024969758.1 441488 444834 - uncharacterized LOC107453356 aug3.g23808 LOC107453356 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02