Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453800 Ptep1.0/2.0 NW_024969604.1 3680 231217 - multiple PDZ domain protein aug3.g23912 LOC107453800 0
LOC110282961 Ptep1.0/2.0 NW_024969604.1 246243 251576 + Ig-like V-type domain-containing protein FAM187A aug3.g23911 LOC110282961 0
LOC107453804 Ptep1.0/2.0 NW_024969604.1 254034 276823 - S-phase kinase-associated protein 2 aug3.g23910,aug3.g23911 LOC107453804 0
LOC107448772 Ptep1.0/2.0 NW_024970002.1 553708 567414 + uncharacterized LOC107448772 aug3.g2390,aug3.g2391 LOC107448772 0
LOC107455295 Ptep1.0/2.0 NW_024970555.1 307964 316741 - uncharacterized LOC107455295 aug3.g6993,aug3.g23914 LOC107455295 0
LOC107453937 Ptep1.0/2.0 NW_024970555.1 374676 399703 - DENN domain-containing protein 1A aug3.g23916 LOC107453937,LOC107453941 0
LOC107453947 Ptep1.0/2.0 NW_024970555.1 399981 446661 + GTPase-activating protein and VPS9 domain-containing protein 1 aug3.g23917 LOC107453947 0
LOC107453949 Ptep1.0/2.0 NW_024970555.1 453822 499331 + gamma-aminobutyric acid type B receptor subunit 1-like aug3.g23918,aug3.g20618 LOC107453949 0
LOC107453948 Ptep1.0/2.0 NW_024970555.1 502887 515944 - zinc finger protein 271 aug3.g23919 LOC107453948 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02