Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453887 Ptep1.0/2.0 NW_024969904.1 669785 679284 + translocon-associated protein subunit beta aug3.g24635 LOC107444785,LOC107453887 0
LOC107448917 Ptep1.0/2.0 NW_024970089.1 585049 587401 + gastrula zinc finger protein XlCGF57.1 aug3.g2463 LOC107448917 0
LOC122270560 Ptep1.0/2.0 NW_024970244.1 338870 350726 - uncharacterized LOC122270560 aug3.g555,aug3.g27021,aug3.g3303,aug3.g24086,aug3.g25561,aug3.g25737,aug3.g11378,aug3.g26737,aug3.g23862,aug3.g13207,aug3.g25176,aug3.g23432,aug3.g27815,aug3.g4200,aug3.g26053,aug3.g25031,aug3.g24630,aug3.g22423,aug3.g17890,aug3.g15308,aug3.g6826,aug3.g22 NA 0
LOC107451931 Ptep1.0/2.0 NW_024970461.1 568990 585758 - putative uncharacterized protein DDB_G0282133 aug3.g24632,aug3.g4404 LOC107451931 0
LOC107443934 Ptep1.0/2.0 NW_024970471.1 31644 42020 + cationic amino acid transporter 4-like aug3.g17560,aug3.g24638 LOC107443934 0
LOC122273413 Ptep1.0/2.0 NW_024975918.1 3604 5163 - translocon-associated protein subunit beta-like aug3.g24635 NA 2e-105
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02