Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456070 Ptep1.0/2.0 NW_024969673.1 130551 160276 - tyrosine-protein kinase CSK aug3.g25188,aug3.g25189 LOC107456070 0
LOC107456074 Ptep1.0/2.0 NW_024969673.1 159588 180921 + snurportin-1 aug3.g25187 LOC107456074 0
LOC107456075 Ptep1.0/2.0 NW_024969673.1 182506 187615 - NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial aug3.g25186 LOC107456075 0
LOC107456073 Ptep1.0/2.0 NW_024969673.1 187697 210419 + DNA methyltransferase 1-associated protein 1 aug3.g25185 LOC107456073 0
LOC107456078 Ptep1.0/2.0 NW_024969673.1 328935 341286 + acanthoscurrin-2 aug3.g25182 LOC107456078 0
LOC107456065 Ptep1.0/2.0 NW_024969673.1 511962 518213 - uncharacterized LOC107456065 aug3.g25181 LOC107456065 0
LOC107456079 Ptep1.0/2.0 NW_024969673.1 653124 707962 - somatostatin receptor type 2-like aug3.g25180 LOC107456079 0
LOC107448985 Ptep1.0/2.0 NW_024970718.1 139106 309402 + mucin-12 aug3.g2518 LOC107448985 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02