Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449009 Ptep1.0/2.0 NW_024969596.1 1476306 1493066 + nodal modulator 3 aug3.g2532 LOC107449009 0
LOC122269684 Ptep1.0/2.0 NW_024969896.1 898767 976252 + dopamine D2-like receptor aug3.g25321 NA 0
LOC107456815 Ptep1.0/2.0 NW_024969896.1 999784 1019612 + dopamine D2-like receptor aug3.g25321 LOC107456815 0
LOC107456945 Ptep1.0/2.0 NW_024969952.1 22204 43199 + elongation factor G, mitochondrial aug3.g18532,aug3.g25323 LOC107456945 0
LOC107456946 Ptep1.0/2.0 NW_024969952.1 48945 100229 + zinc finger CCCH domain-containing protein 13 aug3.g25324,aug3.g22502 LOC110283594,LOC107456946,LOC107456896 0
LOC107456948 Ptep1.0/2.0 NW_024969952.1 140276 249202 + fibronectin type-III domain-containing protein 3A aug3.g25325 LOC107456948 0
LOC107456941 Ptep1.0/2.0 NW_024969952.1 256575 268458 - mediator of RNA polymerase II transcription subunit 4 aug3.g25327 LOC107456941 0
LOC107456955 Ptep1.0/2.0 NW_024969952.1 272858 282777 - uncharacterized LOC107456955 aug3.g25328 LOC107456955 0
LOC107456944 Ptep1.0/2.0 NW_024969952.1 293582 315790 - uncharacterized LOC107456944 aug3.g25329 LOC107456944 0
LOC122272582 Ptep1.0/2.0 NW_024972294.1 2740 13545 - elongation factor G, mitochondrial-like aug3.g25323 LOC107456945 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02