Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449006 Ptep1.0/2.0 NW_024969596.1 1277973 1289590 - 40S ribosomal protein S18 aug3.g2540 LOC107449006,LOC107448890 0
LOC107451346 Ptep1.0/2.0 NW_024969701.1 587386 878494 - latrophilin Cirl aug3.g25404 LOC107451346 0
LOC107451583 Ptep1.0/2.0 NW_024969701.1 1005678 1215021 - uncharacterized LOC107451583 aug3.g25402 LOC107451583 5e-120
LOC122268903 Ptep1.0/2.0 NW_024969701.1 1248926 1255058 + uncharacterized LOC122268903 aug3.g25401,aug3.g14099,aug3.g5419,aug3.g18854,aug3.g21120,aug3.g24107,aug3.g17828 NA 0
LOC107451266 Ptep1.0/2.0 NW_024969701.1 1264272 1294490 + E3 ubiquitin-protein ligase RFWD3 aug3.g25400,aug3.g22272 LOC107451266 0
LOC107436212 Ptep1.0/2.0 NW_024970112.1 644008 869122 + leucine-rich repeat-containing protein 24 aug3.g25406 LOC107436212 0
LOC107436206 Ptep1.0/2.0 NW_024970112.1 1042550 1099844 - glutamate receptor 1-like aug3.g25408 LOC107436206 0
LOC122270271 Ptep1.0/2.0 NW_024970112.1 1132379 1191052 - glutamate receptor 1-like aug3.g25408 LOC107436206 0
LOC122273232 Ptep1.0/2.0 NW_024974843.1 453 6822 + E3 ubiquitin-protein ligase RFWD3-like aug3.g25400 NA 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02