Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107449059 Ptep1.0/2.0 NW_024969739.1 589639 657520 + uncharacterized LOC107449059 aug3.g2564,aug3.g2565 LOC107449059 0
LOC107446764 Ptep1.0/2.0 NW_024969992.1 357756 382551 + uncharacterized LOC107446764 aug3.g25655 LOC107446764 3e-167
LOC107446825 Ptep1.0/2.0 NW_024969992.1 481610 499188 - zonadhesin aug3.g25654,aug3.g25652 LOC107446825 0
LOC107446757 Ptep1.0/2.0 NW_024969992.1 500573 512666 - zonadhesin-like aug3.g25651 LOC107446757 0
LOC107446748 Ptep1.0/2.0 NW_024969992.1 519714 524846 - von Willebrand factor-like aug3.g25650 LOC107446748 0
LOC122273056 Ptep1.0/2.0 NW_024973875.1 603 7547 - inducible metalloproteinase inhibitor protein-like aug3.g25654 LOC107446825 1e-120
6 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02