Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436449 Ptep1.0/2.0 NW_024969927.1 301733 308210 - uncharacterized LOC107436449 aug3.g26031 LOC107436449 0
LOC107436454 Ptep1.0/2.0 NW_024969927.1 321692 343413 - cysteine-rich venom protein 6-like aug3.g26032 LOC107436454 4e-151
LOC107436455 Ptep1.0/2.0 NW_024969927.1 337087 339006 - chymotrypsin inhibitor-like aug3.g26033 LOC107436455 1e-149
LOC107436451 Ptep1.0/2.0 NW_024969927.1 358168 370115 - proton-coupled folate transporter-like aug3.g26034 LOC107436451 0
LOC107436458 Ptep1.0/2.0 NW_024969927.1 374506 479516 - proton-coupled folate transporter aug3.g26035,aug3.g26036 LOC107436458 0
LOC107436452 Ptep1.0/2.0 NW_024969927.1 432280 475414 + serine/arginine repetitive matrix protein 1-like aug3.g26037 LOC107436452 0
LOC122269773 Ptep1.0/2.0 NW_024969927.1 485015 488261 - microsomal triglyceride transfer protein-like aug3.g26038 LOC107436460 2e-132
LOC107436460 Ptep1.0/2.0 NW_024969927.1 490557 501735 - uncharacterized LOC107436460 aug3.g26038 LOC107436460 0
LOC107436453 Ptep1.0/2.0 NW_024969927.1 503147 523769 - microsomal triglyceride transfer protein large subunit aug3.g26038 LOC107436453 0
LOC122269775 Ptep1.0/2.0 NW_024969927.1 531543 533597 + zinc finger MYM-type protein 1-like aug3.g26039 NA 0
LOC107436394 Ptep1.0/2.0 NW_024970248.1 335259 427891 - glycine receptor subunit alpha-1 aug3.g26030 LOC107436394 0
LOC107449190 Ptep1.0/2.0 NW_024970804.1 190451 223057 + uncharacterized LOC107449190 aug3.g2603 LOC107449190 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02