Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436528 Ptep1.0/2.0 NW_024969848.1 78720 118711 - TBC1 domain family member 2B aug3.g26049,aug3.g14399 LOC107436528 0
LOC107436461 Ptep1.0/2.0 NW_024969927.1 538651 551640 - bone morphogenetic protein 3 aug3.g26040 LOC107436461 0
LOC107436462 Ptep1.0/2.0 NW_024969927.1 586050 599517 - ragulator complex protein LAMTOR3 aug3.g26041 LOC107436462 0
LOC107436464 Ptep1.0/2.0 NW_024969927.1 603259 632335 - uncharacterized LOC107436464 aug3.g26042 LOC107436463,LOC107436464 0
LOC107436465 Ptep1.0/2.0 NW_024969927.1 663375 752696 - B-cell lymphoma/leukemia 11A aug3.g26043 LOC107436465 0
LOC107436457 Ptep1.0/2.0 NW_024970371.1 176903 239863 - homeobox protein SIX6-like aug3.g26046 LOC107436457 0
LOC107436467 Ptep1.0/2.0 NW_024970371.1 304580 336869 + homeobox protein six1 aug3.g26047 LOC107436467 0
LOC107440838 Ptep1.0/2.0 NW_024970371.1 348470 373740 - actin-related protein 3 aug3.g25493,aug3.g26048 LOC110283370,LOC107440838 0
LOC107449188 Ptep1.0/2.0 NW_024971043.1 1779 50612 + uncharacterized LOC107449188 aug3.g2604 LOC107449188 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02