Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452276 Ptep1.0/2.0 NW_024969822.1 716982 718254 - uncharacterized LOC107452276 aug3.g23590,aug3.g26652,aug3.g1344,aug3.g15708 LOC107452276 0
LOC107449287 Ptep1.0/2.0 NW_024970126.1 455713 457755 - transcription factor Sox-14-like aug3.g2665 LOC107449287 0
LOC107439065 Ptep1.0/2.0 NW_024970356.1 247264 252653 - chromatin modification-related protein MEAF6 aug3.g26659 LOC107439065 0
LOC107439064 Ptep1.0/2.0 NW_024970356.1 252901 323955 + PAX-interacting protein 1 aug3.g26658 LOC107439064 0
LOC107439054 Ptep1.0/2.0 NW_024970356.1 331561 339602 - uncharacterized LOC107439054 aug3.g26657 LOC107439054 0
LOC107439063 Ptep1.0/2.0 NW_024970356.1 346322 364551 - CDGSH iron-sulfur domain-containing protein 3, mitochondrial aug3.g26656 LOC107439063 0
LOC107439062 Ptep1.0/2.0 NW_024970356.1 364861 366059 + nucleic acid dioxygenase ALKBH1 aug3.g26655 LOC107439062 0
LOC107439061 Ptep1.0/2.0 NW_024970356.1 376171 461120 - Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 aug3.g26654 LOC107439061 0
LOC107439058 Ptep1.0/2.0 NW_024971146.1 12939 94546 + regulator of G-protein signaling 12 aug3.g26650,aug3.g24025 LOC107439058 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02