Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440018 Ptep1.0/2.0 NW_024969883.1 553284 572952 + retinol dehydrogenase 7 aug3.g26959 LOC107440018 0
LOC107440017 Ptep1.0/2.0 NW_024969883.1 574841 580497 - pyroglutamyl-peptidase 1 aug3.g26958 LOC107440017 0
LOC107440028 Ptep1.0/2.0 NW_024969883.1 590518 616984 - UBX domain-containing protein 1-B aug3.g26957 LOC107440028,LOC107440027 0
LOC107440033 Ptep1.0/2.0 NW_024969883.1 625232 685359 - uncharacterized LOC107440033 aug3.g26956 LOC107440033 0
LOC107440016 Ptep1.0/2.0 NW_024969883.1 683130 736592 + basigin aug3.g26952,aug3.g26953 LOC107440016 0
LOC107440015 Ptep1.0/2.0 NW_024969883.1 745962 786233 + short-chain dehydrogenase/reductase family 9C member 7 aug3.g26951 LOC107440015 0
LOC107440014 Ptep1.0/2.0 NW_024969883.1 790354 817234 - uncharacterized LOC107440014 aug3.g26950,aug3.g26951 LOC107440014 0
LOC107449323 Ptep1.0/2.0 NW_024970250.1 618697 655237 - F-box-like/WD repeat-containing protein TBL1XR1 aug3.g2695 LOC107449323 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02