Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440488 Ptep1.0/2.0 NW_024969823.1 928795 943259 - replication factor C subunit 5 aug3.g27069 LOC107440488 0
LOC107440487 Ptep1.0/2.0 NW_024969823.1 943863 946180 + heat shock 70 kDa protein cognate 4 aug3.g27068 LOC107440487 0
LOC107440486 Ptep1.0/2.0 NW_024969823.1 972636 1044237 + matrix metalloproteinase-2 aug3.g27067 LOC107440486 0
LOC107440485 Ptep1.0/2.0 NW_024969823.1 1045440 1080789 - E3 ubiquitin-protein ligase Bre1 aug3.g27066 LOC107440485 0
LOC107440484 Ptep1.0/2.0 NW_024969823.1 1080827 1092220 + S-formylglutathione hydrolase aug3.g27065 LOC107440484 0
LOC107440482 Ptep1.0/2.0 NW_024969823.1 1093466 1098141 - heparan-sulfate 6-O-sulfotransferase 3-B aug3.g27064 LOC107440482 0
LOC107440483 Ptep1.0/2.0 NW_024969823.1 1098302 1124250 + serine/arginine-rich splicing factor 4 aug3.g27063 LOC107440483 0
LOC107440480 Ptep1.0/2.0 NW_024969823.1 1128489 1176787 + choline/ethanolamine kinase aug3.g27062 LOC107440480 0
LOC107440479 Ptep1.0/2.0 NW_024969823.1 1178415 1191380 - zinc transporter 1 aug3.g27061 LOC107440479 0
LOC107449325 Ptep1.0/2.0 NW_024970084.1 551523 570960 - ras-related protein Rab-22A aug3.g2706 LOC107449325 0
LOC107440438 Ptep1.0/2.0 NW_024970875.1 74905 104238 - WD repeat and SOCS box-containing protein 1 aug3.g9018,aug3.g27060 LOC107440438 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02