Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455064 Ptep1.0/2.0 NW_024969685.1 597392 1050732 - apoptosis-stimulating of p53 protein 1 aug3.g330,aug3.g331 LOC107455064 0
LOC107450390 Ptep1.0/2.0 NW_024969707.1 1172380 1182501 - uncharacterized LOC107450390 aug3.g3300,aug3.g23497 LOC107450390 0
LOC107450394 Ptep1.0/2.0 NW_024969707.1 1185724 1187904 + uncharacterized LOC107450394 aug3.g3301 LOC107450394 0
LOC107450382 Ptep1.0/2.0 NW_024969707.1 1198690 1200873 - uncharacterized LOC107450382 aug3.g3305,aug3.g3302,aug3.g22182,aug3.g22181,aug3.g3304,aug3.g3300,aug3.g3299,aug3.g3306 LOC107450382 0
LOC107450386 Ptep1.0/2.0 NW_024969707.1 1215961 1220152 + uncharacterized LOC107450386 aug3.g3305,aug3.g3301 LOC107450386 0
LOC122270560 Ptep1.0/2.0 NW_024970244.1 338870 350726 - uncharacterized LOC122270560 aug3.g555,aug3.g27021,aug3.g3303,aug3.g24086,aug3.g25561,aug3.g25737,aug3.g11378,aug3.g26737,aug3.g23862,aug3.g13207,aug3.g25176,aug3.g23432,aug3.g27815,aug3.g4200,aug3.g26053,aug3.g25031,aug3.g24630,aug3.g22423,aug3.g17890,aug3.g15308,aug3.g6826,aug3.g22 NA 0
LOC107450408 Ptep1.0/2.0 NW_024970599.1 148878 160969 + proton-coupled folate transporter-like aug3.g3309 LOC107450408 0
LOC107450410 Ptep1.0/2.0 NW_024970599.1 179204 232776 - arfGAP with SH3 domain, ANK repeat and PH domain-containing protein aug3.g3308 LOC107450410 0
LOC110281898 Ptep1.0/2.0 NW_024972132.1 6873 11510 - uncharacterized LOC110281898 aug3.g3305 LOC110281898 0
LOC107450384 Ptep1.0/2.0 NW_024972132.1 18897 25582 - uncharacterized LOC107450384 aug3.g3307 LOC107450384 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02