Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455061 Ptep1.0/2.0 NW_024969685.1 1159893 1348643 + myosin-I heavy chain aug3.g337 LOC107455061 0
LOC107450790 Ptep1.0/2.0 NW_024969925.1 265 37988 + methionine synthase reductase aug3.g21324,aug3.g3379 LOC107450790 0
LOC107450468 Ptep1.0/2.0 NW_024969925.1 38613 46486 - transmembrane protein 17 aug3.g3378 LOC107450468 0
LOC107450491 Ptep1.0/2.0 NW_024969925.1 46634 48784 + 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like aug3.g3377 LOC107450491 0
LOC107450484 Ptep1.0/2.0 NW_024969925.1 53034 59092 - glycosylphosphatidylinositol anchor attachment 1 protein-like aug3.g3376,aug3.g3377 LOC107450484 0
LOC107450482 Ptep1.0/2.0 NW_024969925.1 59224 74582 + protein RER1 aug3.g3375 LOC107450482 0
LOC107450476 Ptep1.0/2.0 NW_024969925.1 82735 148872 + cytochrome b5 aug3.g3370 LOC107450476 0
LOC107450477 Ptep1.0/2.0 NW_024969925.1 93831 118379 - uncharacterized LOC107450477 aug3.g3372 LOC107450477 0
LOC107453401 Ptep1.0/2.0 NW_024972609.1 4282 6698 + uncharacterized LOC107453401 aug3.g5459,aug3.g15470,aug3.g15469,aug3.g3374 LOC107453401 0
LOC122273718 Ptep1.0/2.0 NW_024979035.1 1378 3271 + unconventional myosin heavy chain 6-like aug3.g337 LOC107455061 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02