Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456155 Ptep1.0/2.0 NW_024969593.1 2072522 2091529 - stress-70 protein, mitochondrial aug3.g358 LOC107456155 0
LOC107437733 Ptep1.0/2.0 NW_024970373.1 16408 17340 + degenerin mec-4-like aug3.g12534,aug3.g12535,aug3.g23395,aug3.g3583 LOC107437733 0
LOC107450757 Ptep1.0/2.0 NW_024970424.1 258985 264574 - uncharacterized LOC107450757 aug3.g3582,aug3.g3581 LOC107450757 0
LOC107450751 Ptep1.0/2.0 NW_024970424.1 271333 272259 + degenerin mec-4-like aug3.g3583 LOC107450751 0
LOC107450756 Ptep1.0/2.0 NW_024970424.1 307944 327601 - DAZ-associated protein 2 aug3.g3584 LOC107450756 0
LOC122270886 Ptep1.0/2.0 NW_024970424.1 351312 357560 - uncharacterized LOC122270886 aug3.g3586 NA 0
LOC107450760 Ptep1.0/2.0 NW_024970882.1 3199 26109 - D-ribitol-5-phosphate cytidylyltransferase aug3.g3586 LOC107450760 0
LOC107450759 Ptep1.0/2.0 NW_024970882.1 26277 28567 + dual specificity protein kinase TTK aug3.g3587 LOC107450759 0
LOC107450746 Ptep1.0/2.0 NW_024970882.1 35573 45462 - coiled-coil domain-containing protein 12 aug3.g3588 LOC107450746 0
LOC107450758 Ptep1.0/2.0 NW_024970882.1 46622 63950 + ubiquitin-conjugating enzyme E2 Z aug3.g3589 LOC107450758 0
LOC122273213 Ptep1.0/2.0 NW_024974738.1 3024 5090 + stress-70 protein, mitochondrial-like aug3.g358 LOC107456155 0
LOC122274047 Ptep1.0/2.0 NW_024989206.1 30 746 + speckle-type POZ protein-like B aug3.g3582 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02