Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456150 Ptep1.0/2.0 NW_024969593.1 1829849 1891521 - amine oxidase [flavin-containing] aug3.g364,aug3.g365 LOC107456150 0
LOC107456157 Ptep1.0/2.0 NW_024969593.1 1896909 1932439 - amine oxidase [flavin-containing] aug3.g364 LOC107456157 0
LOC107445459 Ptep1.0/2.0 NW_024969786.1 364790 385951 - WD repeat-containing protein on Y chromosome-like aug3.g18567,aug3.g3644 LOC107445459 0
LOC107450860 Ptep1.0/2.0 NW_024969786.1 387641 411902 + 26S proteasome non-ATPase regulatory subunit 1 aug3.g3645 LOC107450860 0
LOC107450851 Ptep1.0/2.0 NW_024969786.1 416434 432929 - succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial aug3.g3646 LOC107450851 0
LOC107450852 Ptep1.0/2.0 NW_024969786.1 445177 491806 - stromelysin-3 aug3.g3647,aug3.g22189 LOC107450852 0
LOC107450858 Ptep1.0/2.0 NW_024969786.1 533626 557592 + cilia- and flagella-associated protein 300 aug3.g3648 LOC107450858 0
LOC107450853 Ptep1.0/2.0 NW_024969786.1 567999 568541 + putative oxidoreductase GLYR1 aug3.g3649 LOC107450853 0
LOC107450838 Ptep1.0/2.0 NW_024970239.1 352445 410109 - uncharacterized LOC107450838 aug3.g3640 LOC107450838 0
LOC107450839 Ptep1.0/2.0 NW_024970239.1 410287 463982 + 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase aug3.g3641 LOC107450839 0
LOC107450835 Ptep1.0/2.0 NW_024970239.1 465294 495712 - gamma-glutamylaminecyclotransferase aug3.g3642 LOC107450835 0
LOC122268459 Ptep1.0/2.0 NW_024979100.1 30 1678 + 26S proteasome non-ATPase regulatory subunit 1-like aug3.g3645 LOC107450860 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02