Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436390 Ptep1.0/2.0 NW_024969612.1 2243023 2261106 + sorbitol dehydrogenase aug3.g15364,aug3.g374,aug3.g24621 LOC107436390,LOC107444723 0
LOC107450980 Ptep1.0/2.0 NW_024969876.1 614654 719951 + T-box transcription factor TBX3-like aug3.g3745,aug3.g5279 LOC107450980 0
LOC107450977 Ptep1.0/2.0 NW_024969876.1 790959 800336 + T-box transcription factor TBX3 aug3.g3746 LOC107450977 0
LOC107450981 Ptep1.0/2.0 NW_024969876.1 810319 852118 - BCAS3 microtubule associated cell migration factor aug3.g3747 LOC107450981 0
LOC107450979 Ptep1.0/2.0 NW_024969876.1 858043 883220 - RNA-binding protein FUS aug3.g3748 LOC107450979 0
LOC107450982 Ptep1.0/2.0 NW_024969876.1 890937 894823 - cuticle protein 16.5-like aug3.g3749 LOC107450982 0
LOC107450969 Ptep1.0/2.0 NW_024971557.1 46133 77193 - fatty-acid amide hydrolase 2 aug3.g3740 LOC107450969 0
LOC107450970 Ptep1.0/2.0 NW_024971557.1 82650 97485 - ankyrin repeat domain-containing protein 54 aug3.g3741 LOC107450970 0
LOC107450971 Ptep1.0/2.0 NW_024971557.1 97662 113335 + serine/threonine-protein kinase 19 aug3.g3742 LOC107450971 0
LOC107450965 Ptep1.0/2.0 NW_024971557.1 122281 141430 + fatty-acid amide hydrolase 2-A aug3.g3743 LOC107450965 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02