Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439095 Ptep1.0/2.0 NW_024969612.1 937074 948430 + uncharacterized LOC107439095 aug3.g397 LOC107439095 0
LOC122268316 Ptep1.0/2.0 NW_024970062.1 1498 4222 - protein asteroid homolog 1-like aug3.g3979 LOC107442505 0
LOC107451349 Ptep1.0/2.0 NW_024970574.1 279482 280912 + tax1-binding protein 3 homolog aug3.g3970 LOC107451349 0
LOC107451345 Ptep1.0/2.0 NW_024970574.1 286098 301841 - translation initiation factor eIF-2B subunit alpha aug3.g3971 LOC107451345 0
LOC107451341 Ptep1.0/2.0 NW_024970681.1 23479 29799 + vitamin K epoxide reductase complex subunit 1 aug3.g3972 LOC107451341 0
LOC107451335 Ptep1.0/2.0 NW_024970681.1 30507 68091 - fatty acid-binding protein aug3.g3973 LOC107451335 0
LOC107451340 Ptep1.0/2.0 NW_024970681.1 79431 81883 - cell division control protein 6 homolog aug3.g3975 LOC107451340 0
LOC107451336 Ptep1.0/2.0 NW_024970681.1 82048 110277 + WD repeat-containing protein 75 aug3.g3976 LOC107451336 0
LOC122271265 Ptep1.0/2.0 NW_024970681.1 110974 114313 + WD repeat-containing protein 75-like aug3.g3976 NA 0
LOC107451338 Ptep1.0/2.0 NW_024970681.1 131591 267371 + FERM domain-containing protein 4A aug3.g3977 LOC107451338 0
LOC122271266 Ptep1.0/2.0 NW_024970681.1 270862 279276 - mitochondrial inner membrane protease ATP23 homolog aug3.g3978 LOC107451339 0
LOC122271286 Ptep1.0/2.0 NW_024970695.1 215571 218645 - uncharacterized LOC122271286 aug3.g3974 NA 5e-62
LOC107442507 Ptep1.0/2.0 NW_024971911.1 24733 33072 + protein asteroid homolog 1-like aug3.g3979,aug3.g16624,aug3.g16623 LOC107442507 0
LOC107451339 Ptep1.0/2.0 NW_024971911.1 35272 42152 + mitochondrial inner membrane protease ATP23 homolog aug3.g3978 LOC107451339 0
LOC122268455 Ptep1.0/2.0 NW_024977321.1 552 3755 - uncharacterized LOC122268455 aug3.g3976 LOC107451336 0
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02