Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439311 Ptep1.0/2.0 NW_024969612.1 856721 871013 + procathepsin L aug3.g398 LOC107439311 0
LOC107445940 Ptep1.0/2.0 NW_024969635.1 2984167 2996503 - uncharacterized LOC107445940 aug3.g114,aug3.g3980,aug3.g21554,aug3.g10019,aug3.g27811,aug3.g19818,aug3.g14784,aug3.g22244,aug3.g15880,aug3.g15878,aug3.g2748,aug3.g18508,aug3.g18878 LOC107445940 0
LOC107438605 Ptep1.0/2.0 NW_024969729.1 1239818 1284950 - E3 SUMO-protein ligase RanBP2 aug3.g13229,aug3.g3981 LOC107438605 0
LOC107449397 Ptep1.0/2.0 NW_024969839.1 389933 391093 + uncharacterized LOC107449397 aug3.g3980,aug3.g2747 LOC107449397 0
LOC107451378 Ptep1.0/2.0 NW_024970554.1 886 21853 + uncharacterized LOC107451378 aug3.g3988 LOC107451378 0
LOC107451370 Ptep1.0/2.0 NW_024970554.1 24617 61326 - dimethylglycine dehydrogenase, mitochondrial aug3.g3987 LOC107451370 0
LOC107451377 Ptep1.0/2.0 NW_024970554.1 61096 78227 + betaine--homocysteine S-methyltransferase 1 aug3.g3986 LOC107451377 0
LOC122268382 Ptep1.0/2.0 NW_024970554.1 80546 230177 + uncharacterized LOC122268382 aug3.g3983 LOC107451375 0
LOC107451369 Ptep1.0/2.0 NW_024970554.1 83993 192472 - solute carrier family 12 member 2-like aug3.g3984,aug3.g3985 LOC107451369 0
LOC107451375 Ptep1.0/2.0 NW_024970554.1 230366 245681 + uncharacterized LOC107451375 aug3.g3983 LOC107451375 0
LOC122271751 Ptep1.0/2.0 NW_024971117.1 16327 19228 - uncharacterized LOC122271751 aug3.g3981 NA 2e-31
LOC107451381 Ptep1.0/2.0 NW_024971330.1 56954 90569 - tetratricopeptide repeat protein 7B aug3.g3989 LOC107451381 0
LOC122271956 Ptep1.0/2.0 NW_024971330.1 90678 103563 + Hermansky-Pudlak syndrome 4 protein homolog aug3.g3988 LOC107451378 0
LOC107451358 Ptep1.0/2.0 NW_024971676.1 24843 26276 - uncharacterized LOC107451358 aug3.g3980 LOC107451358 0
LOC122272500 Ptep1.0/2.0 NW_024972133.1 23283 26247 + citron Rho-interacting kinase-like aug3.g3981 NA 0
LOC107450131 Ptep1.0/2.0 NW_024972408.1 21287 26827 - protein HIRA aug3.g3981 LOC107450131 3e-119
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02