Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107440074 Ptep1.0/2.0 NW_024969612.1 558796 580628 + uncharacterized LOC107440074 aug3.g407 LOC107440074,LOC107449165 0
LOC107451519 Ptep1.0/2.0 NW_024969690.1 792787 829053 + ran-binding protein 9 aug3.g4079 LOC107451519 0
LOC107451507 Ptep1.0/2.0 NW_024969916.1 363472 375672 + uncharacterized LOC107451507 aug3.g4077 LOC107451507 0
LOC107451508 Ptep1.0/2.0 NW_024969916.1 380110 541420 - uncharacterized LOC107451508 aug3.g4076 LOC107451508 0
LOC107451510 Ptep1.0/2.0 NW_024969916.1 571912 643877 + transmembrane protein 87A aug3.g4074 LOC107451510 0
LOC107451509 Ptep1.0/2.0 NW_024969916.1 652743 778706 - dyslexia-associated protein KIAA0319-like protein aug3.g4073 LOC107451509 0
LOC107451506 Ptep1.0/2.0 NW_024969916.1 775532 776770 - uncharacterized LOC107451506 aug3.g4072,aug3.g27813,aug3.g19658 LOC107451506 0
LOC107451505 Ptep1.0/2.0 NW_024969916.1 781620 784069 + uncharacterized protein K02A2.6-like aug3.g4071,aug3.g15980 LOC107451505 0
LOC107451265 Ptep1.0/2.0 NW_024970061.1 84971 85754 - uncharacterized LOC107451265 aug3.g3899,aug3.g4072,aug3.g10673 LOC107451265 0
LOC107451502 Ptep1.0/2.0 NW_024970235.1 1475000 1490329 - neuroligin-4, X-linked-like aug3.g4070 LOC107451502 0
LOC122270549 Ptep1.0/2.0 NW_024970235.1 1575042 1575805 - neuroligin-4, X-linked-like aug3.g4070 NA 0
LOC122271450 Ptep1.0/2.0 NW_024970824.1 86263 87240 - uncharacterized LOC122271450 aug3.g4072 NA 0
LOC122271480 Ptep1.0/2.0 NW_024970858.1 10396 11961 + uncharacterized LOC122271480 aug3.g4072 NA 0
LOC122272757 Ptep1.0/2.0 NW_024972745.1 53 2033 - pseudogene aug3.g4071 NA 9e-177
LOC122273328 Ptep1.0/2.0 NW_024975502.1 9 3525 - cholinesterase 1-like aug3.g4070 NA 7e-167
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02