Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443783 Ptep1.0/2.0 NW_024969706.1 2038945 2314643 - plexin-A2 aug3.g428 LOC107443783 0
LOC107453195 Ptep1.0/2.0 NW_024969855.1 310187 310654 + uncharacterized LOC107453195 aug3.g10706,aug3.g4284 LOC107453195 0
LOC107451754 Ptep1.0/2.0 NW_024969906.1 191981 220382 + histone-arginine methyltransferase CARMER aug3.g4283,aug3.g20178 LOC107451754 0
LOC122269721 Ptep1.0/2.0 NW_024969906.1 227462 231218 + uncharacterized LOC122269721 aug3.g4283 LOC107451754 0
LOC107451753 Ptep1.0/2.0 NW_024969906.1 232465 243765 - mediator of RNA polymerase II transcription subunit 8 aug3.g4282 LOC107451753 0
LOC107451750 Ptep1.0/2.0 NW_024969906.1 287987 354454 + FYN-binding protein 1 aug3.g4281 LOC107451750 0
LOC107451757 Ptep1.0/2.0 NW_024969906.1 352601 385598 - rab11 family-interacting protein 1 aug3.g4280 LOC107451757 0
LOC107451766 Ptep1.0/2.0 NW_024970268.1 124542 125907 - ionotropic receptor 93a-like aug3.g4285 LOC107451766 0
LOC107451770 Ptep1.0/2.0 NW_024970268.1 200360 257176 + uncharacterized LOC107451770 aug3.g4286 LOC107451770 0
LOC107451767 Ptep1.0/2.0 NW_024970268.1 294851 317434 + paired mesoderm homeobox protein 2A-like aug3.g4287 LOC107451767 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02