Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451897 Ptep1.0/2.0 NW_024969659.1 1299745 1675799 + protein-L-histidine N-pros-methyltransferase aug3.g4382,aug3.g4385 LOC107451897 0
LOC107451898 Ptep1.0/2.0 NW_024969659.1 1672664 1707195 - uncharacterized LOC107451898 aug3.g4381 LOC107451898 0
LOC107451896 Ptep1.0/2.0 NW_024969659.1 1704644 1725132 + uncharacterized LOC107451896 aug3.g4380 LOC107451896 7e-130
LOC107451905 Ptep1.0/2.0 NW_024969677.1 3051 4884 + uncharacterized LOC107451905 aug3.g4386 LOC107451905 0
LOC122269032 Ptep1.0/2.0 NW_024969723.1 309931 317966 - uncharacterized LOC122269032 aug3.g492,aug3.g2759,aug3.g24028,aug3.g2515,aug3.g25540,aug3.g27418,aug3.g18137,aug3.g4383,aug3.g18902,aug3.g10208 NA 0
LOC107452457 Ptep1.0/2.0 NW_024969878.1 662996 666019 + DNA-directed RNA polymerase III subunit RPC10 aug3.g438 LOC107452457 0
LOC107448818 Ptep1.0/2.0 NW_024971658.1 1520 3716 + uncharacterized protein K02A2.6-like aug3.g20476,aug3.g23584,aug3.g4389 LOC107448818 0
LOC122268302 Ptep1.0/2.0 NW_024972095.1 1936 3779 - uncharacterized LOC122268302 aug3.g4388 NA 0
LOC107451906 Ptep1.0/2.0 NW_024972095.1 3729 5201 - uncharacterized LOC107451906 aug3.g4388 LOC107451906 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02