Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107451965 Ptep1.0/2.0 NW_024969947.1 731647 784600 + microtubule organizer protein 1 aug3.g4426 LOC107451965 0
LOC107451963 Ptep1.0/2.0 NW_024970267.1 1453 10909 - thioredoxin domain-containing protein 5 aug3.g4427,aug3.g22388 LOC107451963 0
LOC107451970 Ptep1.0/2.0 NW_024970267.1 11074 19782 + 60S acidic ribosomal protein P1 aug3.g4428 LOC107451970 0
LOC107451967 Ptep1.0/2.0 NW_024970267.1 19820 39144 - vacuolar protein sorting-associated protein VTA1 homolog aug3.g4429 LOC107451967 0
LOC107451953 Ptep1.0/2.0 NW_024970674.1 124562 129761 + uncharacterized LOC107451953 aug3.g4425,aug3.g20823 LOC107451953 0
LOC107451955 Ptep1.0/2.0 NW_024970674.1 134007 141204 + uncharacterized LOC107451955 aug3.g4424 LOC107451955 0
LOC107451949 Ptep1.0/2.0 NW_024970674.1 146723 156438 - uncharacterized LOC107451949 aug3.g4423 LOC107451949 0
LOC122271257 Ptep1.0/2.0 NW_024970674.1 157949 163825 - uncharacterized LOC122271257 aug3.g4423 LOC107451949 1e-167
LOC107451948 Ptep1.0/2.0 NW_024970674.1 171605 176797 - uncharacterized LOC107451948 aug3.g22667,aug3.g4422 LOC107451948 0
LOC107451950 Ptep1.0/2.0 NW_024970674.1 182491 239048 - uncharacterized LOC107451950 aug3.g4421 LOC107451950 0
LOC122271259 Ptep1.0/2.0 NW_024970674.1 193601 210947 - uncharacterized LOC122271259 aug3.g4420,aug3.g4419 NA 0
LOC107451951 Ptep1.0/2.0 NW_024970674.1 196854 213745 + uncharacterized LOC107451951 aug3.g4421 LOC107451951 0
LOC122273662 Ptep1.0/2.0 NW_024978276.1 7 1910 - vacuolar protein sorting-associated protein VTA1 homolog aug3.g4429 NA 9e-165
LOC107452518 Ptep1.0/2.0 NW_024979534.1 1016 1777 - H/ACA ribonucleoprotein complex subunit 2-like protein aug3.g442 LOC107452518 0
LOC122273841 Ptep1.0/2.0 NW_024981563.1 114 1667 - uncharacterized LOC122273841 aug3.g4421 NA 0
15 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02