Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443540 Ptep1.0/2.0 NW_024969659.1 415992 427420 - uridine 5'-monophosphate synthase-like aug3.g469 LOC107443540 0
LOC107447873 Ptep1.0/2.0 NW_024970047.1 31968 37364 + beta-1,4-galactosyltransferase 7-like aug3.g4694 LOC107447873 3e-21
LOC107452359 Ptep1.0/2.0 NW_024970357.1 94931 132619 + OTU domain-containing protein 7B aug3.g4698 LOC107452359 0
LOC107452353 Ptep1.0/2.0 NW_024970357.1 144629 145213 + N-acetyltransferase aca1 aug3.g4697 LOC107452353 0
LOC107452361 Ptep1.0/2.0 NW_024970357.1 158492 171950 - uncharacterized LOC107452361 aug3.g4696 LOC107452361 0
LOC107452358 Ptep1.0/2.0 NW_024970357.1 192805 215792 - PSME3-interacting protein aug3.g4695 LOC107452358 0
LOC107452355 Ptep1.0/2.0 NW_024970357.1 215876 257445 + protein NDRG3 aug3.g4694,aug3.g4693 LOC107452355 0
LOC122271162 Ptep1.0/2.0 NW_024970611.1 204905 206436 + uncharacterized LOC122271162 aug3.g4696 NA 1e-29
LOC122272536 Ptep1.0/2.0 NW_024972192.1 24545 27148 + uncharacterized LOC122272536 aug3.g4690 NA 2e-18
LOC122272795 Ptep1.0/2.0 NW_024972861.1 10324 16873 - uncharacterized LOC122272795 aug3.g4694 NA 2e-44
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02